Leptolyngbya boryana: LBWT_370
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Entry
LBWT_370 CDS
T04848
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lbo
Leptolyngbya boryana
Pathway
lbo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lbo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LBWT_370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbo03021
]
LBWT_370
03400 DNA repair and recombination proteins [BR:
lbo03400
]
LBWT_370
Enzymes [BR:
lbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LBWT_370
Transcription machinery [BR:
lbo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LBWT_370
DNA repair and recombination proteins [BR:
lbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LBWT_370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DUF5887
Motif
Other DBs
NCBI-ProteinID:
BAS54154
LinkDB
All DBs
Position
41922..45242
Genome browser
AA seq
1106 aa
AA seq
DB search
MTEQQTYTTPAFVLPDLVEIQRASFRWFLEEGLIEELDSFSPITDYTGKLELHFIGKNFK
LKRPKYDVDEAKRRDSTYAVQMYVPTRLINKETGEIKEQEVFIGDLPLMTDRGTFIINGA
ERVIVNQIVRSPGVYYKSETDKNGRRTYNASLIPNRGAWLKFETDKNDLVWVRIDKTRKL
SAQVLLKALGLTDNEIFDSLRHPEYFQKTIEKEGQYGEEEALMELYRKLRPGEPPTVSGG
AQLLESRFFDPKRYDLGKVGRYKLNKKLRLNVPEATRVLTPQDILSAIDYLINLEFDIGM
IDDIDHLGNRRVRSVGELLQNQVRVGLNRLERIIRERMTVSDSDSLTPASLVNPKPLVAA
IKEFFGSSQLSQFMDQTNPLAELTHKRRISALGPGGLTRERAGFAVRDIHPSHYGRICPI
ETPEGPNAGLIGSLATHARVNPYGFIETPYYKVENGRVRKDLPAVYMTADEEDDLRVAAG
DINTDEDNNIIGESIAVRYRQDFTTAAPEEVDYVAVSPVQIISVATSLIPFLEHDDANRA
LMGSNMQRQAVPLLRPERPLVGTGLEAQAARDSGMVVVSRTDGEVTYVDATTLRVKDAAT
GKEIEYQMQKYQRSNQDTCLNQRPIVFVGDKVRAGEILADGSATERGELALGQNILVAYM
PWEGYNYEDAILISERLVYDDVYTSIHIEKYEIEARQTKLGPEEITREIPNVGEDSLRQL
DENGIIRIGAYVEAGDILVGKVTPKGESDQPPEEKLLRAIFGEKARDVRDNSLRVPNGEK
GRIVDVRVFTREQGDELPPGANMVVRVYVAQKRKIQVGDKMAGRHGNKGIISRILPIEDM
PYLPDGTPVDIVLNPLGVPSRMNVGQVYECLLGWAAQCLEARFKIVPFDEMHGEEKSRES
VHGKLQEAQDTRIKATADGYWLYNPDDPGKIQVYDGRTGEAFDRPITIGKAYMLKLVHLV
DDKIHARSTGPYSLVTQQPLGGKAQQGGQRFGEMEVWALEAFGAAYTLQELLTVKSDDMQ
GRNEALNAIVKGKAIPRPGTPESFKVLMRELQSLCLDVAVHKVETKDDGSSRDMEVDLMA
DVNSRRAPSRPTYESISRESLEEDDD
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcagcagacctataccactcccgccttcgtactaccggatttagttgaaatc
cagcgggcaagcttccgttggtttctcgaagaagggcttatcgaagaactcgacagcttt
tcaccgattactgattacaccgggaagctagaacttcattttatcggcaaaaacttcaaa
ctgaaacgtccgaagtatgatgtcgatgaagctaagcgtcgagacagcacttacgccgtt
cagatgtatgtccccactcgcctcatcaacaaagagactggggaaatcaaagaacaggaa
gtgtttattggtgacttgccgctgatgaccgatcgcggaacgttcatcatcaacggtgcg
gaacgtgtgatcgtcaatcagatcgttcgtagtcctggcgtatattacaagtcggaaacc
gataagaatggtcgtcggacttacaatgcgagtttgattcccaaccgaggcgcatggttg
aagtttgaaaccgataagaacgacttggtttgggtacggatcgataaaactcggaaactg
tcggcgcaagtgctcctcaaagcgttgggtctgaccgataacgagatttttgattcgctg
agacatccggagtatttccagaaaacgatcgagaaagaaggtcagtacggcgaagaagaa
gcgttgatggagctttaccggaaattgcgtccgggtgagcctccgaccgtttcaggtgga
gcacaacttttagagtcgagattctttgaccccaaacgctacgacttgggcaaagtgggt
cgctataagttgaacaaaaaattgcgcctgaacgtaccggaagcgaccagagttctgact
ccgcaagatatcttgtcggcgatcgactatctgatcaacctggaattcgatatcggcatg
atcgacgatattgaccacttgggaaatcgtcgcgttcgttcggttggtgaattgctgcaa
aaccaggtgcgagttgggctgaaccgtttagaaagaatcattcgggaacggatgactgtt
tctgattcggattcattaactcctgcatctttggtcaacccgaaaccgttggtcgctgca
atcaaagagttctttggttcgtcgcagctatcccagttcatggatcaaaccaatcctctc
gccgagctgacccacaaacgccggatcagcgcactcggtccaggtggcctgactcgtgag
cgtgcaggtttcgcggtgcgtgatattcacccatcgcactatggacggatctgcccgatc
gagactcctgaaggcccgaacgcaggtctgattggctcactcgcaacccacgcacgcgtc
aatccgtacggatttatcgaaactccttattacaaggtcgagaacggtcgggttcgcaaa
gacttgccagccgtctatatgaccgcggacgaagaagacgatctgcgggtggcagcaggt
gacatcaacaccgacgaagacaacaacatcattggagaatcgatcgcagttcgatatcgc
caagactttacgactgctgcacctgaagaagtggactatgttgccgtttctccggtacag
atcatctcggttgcaacttcgctgattccattcctggaacacgatgacgcgaaccgagcc
ttaatgggatcgaacatgcaacgtcaggcagttcctctgctgcgtccagaacgtccttta
gtgggaactgggttagaagcacaggcagcgcgtgactctgggatggtcgtcgtcagccga
actgatggtgaagtgacttatgtcgatgcgacaacgctgcgcgtgaaagatgctgcaact
ggtaaagaaattgaataccagatgcagaagtatcagcgatcgaaccaagatacctgctta
aaccaacgcccgatcgtctttgtcggcgataaggtgagagctggggaaattttggcagac
ggttctgcgactgagcgaggcgaattagcgctaggtcaaaacatcctagtcgcctacatg
ccttgggaaggctacaactacgaggatgcgattctaattagtgaacgcctcgtttacgac
gacgtttatacctcaattcacattgagaaatatgaaattgaagcgcgtcaaaccaagtta
gggccggaagaaatcacgcgtgaaattcccaacgttggggaagattctctgcgtcaactg
gatgaaaacggcattatccgaattggagcctatgtcgaagcgggcgatatcctcgtcggt
aaagtgactccgaaaggggaatctgatcagcctcctgaagaaaaactcctgagagcgatc
ttcggtgaaaaggcgcgcgatgtaagagacaactctttgcgtgtaccaaacggtgagaaa
ggtcggatcgttgacgtgcgggtgtttactcgtgagcaaggagacgaattgccgccgggt
gcaaacatggttgttcgtgtttatgtcgctcagaaacggaagatccaagtcggcgacaaa
atggcggggagacatggaaataaagggattatttcgcggattttaccgatcgaagatatg
ccctatcttcccgatggcacacccgttgacatcgttctgaatccactcggtgtaccgagc
cggatgaacgtgggtcaggtctatgaatgtctcttaggctgggcagctcaatgtctggaa
gctcgattcaaaatcgtgccatttgatgaaatgcacggcgaagaaaaatcgcgtgaatcg
gtgcatggcaaattgcaggaagctcaggacacgcggatcaaagccaccgcagatggttac
tggctctacaatccagacgatccaggtaagattcaggtctatgacggacgaacgggtgaa
gccttcgatcgaccgatcacaatcggtaaagcttacatgctgaaactggttcacttggtt
gacgacaagatccacgcgcgatcgactggtccgtactcgctcgttactcagcaaccgttg
ggtggaaaagcgcagcagggtggacagcgattcggagaaatggaagtgtgggcgctcgaa
gcatttggagctgcttacaccctgcaagaattgctgacggtgaaatccgacgacatgcaa
gggcgaaatgaagcgctcaatgcgatcgttaaaggtaaagccattccgcgacctggaaca
ccggaatcctttaaggtcttgatgcgcgagttgcaatctctctgtcttgatgtggcagtc
cacaaggttgagaccaaagacgatggaagcagccgagatatggaagttgatttaatggcg
gatgtcaatagccgtcgcgcgccgtcgcgtccaacttatgagtcgatttcgcgtgaatcg
ctggaagaggacgacgattaa
DBGET
integrated database retrieval system
