Lonsdalea britannica: CKQ53_09620
Help
Entry
CKQ53_09620 CDS
T05623
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
lbq
Lonsdalea britannica
Pathway
lbq00730
Thiamine metabolism
lbq01100
Metabolic pathways
lbq01240
Biosynthesis of cofactors
lbq04122
Sulfur relay system
Module
lbq_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
lbq00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CKQ53_09620
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
CKQ53_09620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbq03016
]
CKQ53_09620
Enzymes [BR:
lbq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
CKQ53_09620
Transfer RNA biogenesis [BR:
lbq03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CKQ53_09620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AXW87216
UniProt:
A0A1X3RZF8
LinkDB
All DBs
Position
2108132..2109580
Genome browser
AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKQYDETLAVVRHWDHIEVRAQDESQR
AIIRDALTRIPGIHHVLEVEEHDYTDLHNIFEQTLAMYRDQVEGKTFCVRVKRRGKHDFS
SQDVERYVGGGLNQHIESARVNLTSPQFTVHLEIEQDRLLLIKGRYEGIGGYPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVKQVAHYLWNRFGSSHRVRFV
AIDFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRMIDNATDTLILRPLISHDKEHIINMARQLGTEDFAKTMPEYCGVISKSPTVKAVKAKI
EHEESQFDFDILDRVVSEARNLDIREIAEQTTQDVVEVETVDAFAANDILLDIRSPDEQD
DRPLSLEQVDIKSLPFYKLATQFGDLDQSKTYLLYCERGVMSRLQALYLREQGFNNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaaaagccaatctgtgcggttg
cgctttatcaaaatcctcacagggaacatccgaaacgttttaaaacagtatgatgaaacg
ctggcggttgtccgtcactgggatcatatcgaagttcgtgctcaagacgaaagccagcgc
gccattatacgcgatgccctgacgcgtattccggggattcaccacgtcctcgaagtggaa
gagcacgactataccgatctgcacaatatcttcgagcaaacgctagccatgtaccgcgat
caggtggaaggcaaaaccttctgcgtgcgcgttaaacggcgcggcaagcacgacttcagc
tctcaggacgttgagcgctatgtcggcggcggcctgaaccagcacatcgaaagcgcgcgg
gtcaatttgacctcgccgcagttcaccgtgcatctggaaatcgagcaggatcgcctgctg
ctgattaaaggtcgctatgaaggcatcggcggctacccgattggtacgcaggaagatgtc
ctgtcgttgatttcgggcggtttcgactccggcgtgtccagttacatgctgatgcgtcgc
ggttgccgcgtgcattactgcttcttcaatctgggcggcgccgcgcatgaaatcggcgtt
aaacaggttgctcactatttgtggaaccgttttggcagctcgcatcgcgttcgctttgtc
gccatcgattttgaaccggtggtcggcgaaattctggagaaagtcgacgacggtcagatg
ggcgttgtactgaaacgcatgatggtgcgggcggcgtcgaaagtggccgaacgctacggc
gtgcaggcgctggtgaccggtgaggcgttgggacaggtatccagccagacgctcaccaac
ctgcgtatgatcgacaacgcgacggatacgctgatcctgcgtccgctgatctcgcacgat
aaagagcacatcatcaatatggcgcgccaactgggcaccgaagacttcgccaagaccatg
ccggaatattgcggcgtgatctcaaaaagcccaacggtgaaagcggtgaaagccaaaatc
gagcacgaagagagtcagttcgacttcgatattctcgatcgcgtcgtgagtgaagcccgc
aatctggatatccgtgagatcgccgaacagaccacgcaggacgtggtggaagtcgaaacg
gtagatgcattcgccgctaacgacatcttgctggatattcgctctccagacgaacaggac
gatcgcccgctgtcgctggaacaggtcgacatcaagtcgctgccgttctacaaactggcg
acccagtttggcgatctggatcagagcaaaacctatctgctctactgcgaacgcggcgtg
atgagccgtctgcaggcgctctatttgcgcgagcagggctttaataacgtgaaggtttat
cgcccctga
DBGET
integrated database retrieval system
