Lonsdalea britannica: CKQ53_16305
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Entry
CKQ53_16305 CDS
T05623
Name
(GenBank) pseudouridine-5-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
lbq
Lonsdalea britannica
Pathway
lbq00240
Pyrimidine metabolism
lbq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbq00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
CKQ53_16305
Enzymes [BR:
lbq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
CKQ53_16305
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
TPP_enzyme_N
TFX_C
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
AXW88379
LinkDB
All DBs
Position
complement(3570565..3571506)
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AA seq
313 aa
AA seq
DB search
MKPYRNTDLLSYSEEVLDALNSGKPVVALESTFISHGLPYPENLATALKIEQEVRHQGAT
PATIGLENGKFLIGMTEKEIDRFASAKGISKITSRDLPVVMAQRGMGATTVASSLVAAEL
AGIAFLASAGIGGVHRGAEKSMDISADLIQFTRSKVAVVCAGAKNILDLGLTLEYLETQC
VPIISWQSDDFPAFYCESSGFRSPHRIDDDMQVASIIEQHWRLGNNSAVLITAPVNKADA
IDRDEVEGIIQQAAEQAEREGIHGPGATPYLMRAVAKATKGKTVKANISVLISNAGVGAR
LAAAHARLLQGEV
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgtatcgaaatactgatttattatcttatagtgaagaggtcctggacgcatta
aatagcgggaaacccgttgttgcgctggagtcgacctttatttctcacggccttccctat
ccagaaaatctggccacagcattaaaaatagaacaagaggtcagacatcaaggcgctact
cccgctactatcgggctggaaaatggcaaattcctcattggcatgacagaaaaagagatc
gatcgcttcgcttcggcgaaaggtatttcgaaaatcaccagccgggatttacctgttgtt
atggcgcagcgtggaatgggcgcgacgacggtggcttcttcgctggtggcggcagaactt
gcaggtattgcgtttcttgcttccgccggcattggcggggtgcatcgtggcgcagagaaa
agtatggatatatccgccgaccttattcagtttacccgttcgaaagtggcggtggtgtgc
gccggagccaagaatattttggatcttggcttaacgctggaatatttagaaacgcaatgt
gtccccatcatttcctggcagtcggatgattttccggctttttattgcgaaagcagcgga
ttccgtagtccacatcgcattgatgacgacatgcaggtcgccagtattattgagcaacac
tggcggctgggaaataacagcgccgtactgattactgcgcctgttaacaaagcggacgcg
atcgatcgcgatgaagttgagggtattattcagcaggctgcggaacaggctgagcgggag
ggtattcacggtcccggcgcaacgccttacctgatgcgcgcggtcgccaaagcgactaaa
ggcaaaaccgtcaaagccaatatttcagtcttgatcagcaatgcgggtgtcggggcacgg
ctggcggctgctcatgcgcgcctcctacagggtgaggtctga
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