Lactiplantibacillus brownii: MH1LPH_18320
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Entry
MH1LPH_18320 CDS
T10750
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lbs Lactiplantibacillus brownii
Pathway
lbs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MH1LPH_18320 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbs03019
]
MH1LPH_18320 (rny)
Messenger RNA biogenesis [BR:
lbs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MH1LPH_18320 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_2nd
KH_2
Motif
Other DBs
NCBI-ProteinID:
BDZ31366
LinkDB
All DBs
Position
complement(1960579..1962138)
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AA seq
519 aa
AA seq
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MNVFGLILAVIAIVVGYGIGYYVRKNVHEKELDVAKNTAEGIISEAKKAAVTQKKEKVLE
AKEESHRYRTEVEGELKQRRNEVQKQEDRLLQREETLDHKENTFEKREDALGKKEDKIAT
EQKRVEQQQQSAASLITQRQAELEKVAALSQDQARERILTQTRDQLTHERAVMIKESTDE
VKSQSEKEAKNLIVQAIQQSAADMVSETTVSVVSLPNDDMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVVLSGFDPIRREIAKIALEKLIQDGRIHPARIEEMVEKARKEMDEKIRE
TGEQTVFDLGLHGMHPDLIKLVGRLNYRTSYGQNVLSHSIEVAKLAGVLAAELGEDVTVA
KRAGLLHDIGKAVDHEIEGSHVEIGVELTTKYKESPVVINTIASHHGDVEAKSIIAVLVA
TADAISAARPGARSESLENYIHRLEKLEAIANDEDGVKKSYAIQAGREIRVIVKPKEISD
LQATVLAHDIKKQIENELEYPGHIKVTVIREVRAVDYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttttcgggttaatcctcgcagtcatcgcgattgttgtcggctatgggattggt
tattatgttcgtaagaatgtccatgaaaaagaattggacgtggccaagaacaccgccgaa
ggtattatttctgaggctaagaaagcagctgtgactcaaaagaaagaaaaagtcctcgaa
gcaaaagaggagagtcatcgctatcgaactgaagttgaaggcgagttgaagcaacgacgg
aatgaagtgcaaaagcaagaagaccgtctgttacaacgcgaagaaactttggaccacaaa
gaaaatacttttgaaaaacgcgaagatgctttgggcaaaaaagaagataaaattgccaca
gagcaaaaacgggttgagcaacagcaacaaagtgcagcttcactaatcacgcaacgtcaa
gcagaattagaaaaggtcgccgccttgtcacaagaccaagcgcgggaacggattttaacg
caaacgcgggatcaattaacgcatgagcgagccgtgatgatcaaagaaagtacggacgag
gtcaaatctcagtctgaaaaagaagctaaaaacttaattgttcaagcgattcagcagagt
gccgccgatatggtttctgaaacgacggtctctgtcgtctcgttaccaaatgatgacatg
aagggccggattattggccgtgaaggtcgcaatattcggacgctagaaacgttgacgggg
atcgatttaattatcgatgacacgccggaagcggtcgttttgagtggctttgatccaatt
cgacgtgagattgctaaaattgcgctcgaaaaattaattcaagacggtcggattcatccg
gctcggattgaagagatggttgaaaaagcccgtaaagaaatggacgagaagattcgtgag
accggtgaacagactgtcttcgatttaggcttgcatgggatgcatcctgatttgatcaag
ttagtcggtcgcttgaattatcggacgagttacggacagaacgtattgagtcattcgatt
gaagttgcgaagttggcgggtgtcttggccgctgaacttggtgaagatgttactgtagcg
aaacgcgcaggattattacacgatattggtaaggctgtcgatcacgagatcgagggttcc
cacgttgaaattggcgtggaattaacaacaaagtacaaagaaagtccagttgtaatcaat
acgatcgcgtcccatcatggggatgtcgaggcgaaatcgattattgctgtgttggttgcg
acggcggatgcaatttctgctgcccggccaggtgctcgaagcgagtcgttggagaattat
attcatcgacttgaaaaacttgaagcgattgctaatgatgaagatggtgtcaagaagagc
tatgcgattcaggcgggtcgtgagattcgagttatcgttaagccaaaagagatttctgat
ttacaggcaactgttttggctcacgatattaaaaagcaaattgaaaatgaacttgaatat
cctggccacattaaagttaccgtgattcgggaagttcgagcagttgactacgctaaataa
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