Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365: LBUL_0005
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Entry
LBUL_0005 CDS
T00419
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lbu
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Brite
KEGG Orthology (KO) [BR:
lbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbu03032
]
LBUL_0005
03400 DNA repair and recombination proteins [BR:
lbu03400
]
LBUL_0005
Enzymes [BR:
lbu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LBUL_0005
DNA replication proteins [BR:
lbu03032
]
Prokaryotic type
DNA Topoisomerases
LBUL_0005
DNA repair and recombination proteins [BR:
lbu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LBUL_0005
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ABJ57701
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Position
4361..6322
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AA seq
653 aa
AA seq
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MADEDNKLKKAKQFEQEADKYNASQIQVLGGLEAVRKRPGMYIGSTSSQGLHHLVWEIID
NGIDEALAGFATKIEVTVNEDNSVTVQDDGRGIPVDIEKKTGRPAVETVYTVLHAGGKFG
GGGYKVSGGLHGVGASVVNALSTKLNVTVMRDGKKYYIAFDHGRVVEELKEVGTVPLTEH
GTIVHFWPDPNIFTETTVFDDKILKNRIRELAFLNKGLKLTFTDKRKDTAETDVYHFEGG
IKEYVSFLNRGQEVLFDEPIYVEGKYEGIDVEVSLQYTTGYKTTLMTFANNIHTYEGGMH
EAGFKTALTRVINDYAHKAKILKENDDNLSGEDIREGMTAVISVKHPSPQFEGQTKTKLG
NSDARTAVDRAFSETFSTFLMENPQVARKIVEKGQLAERARVAAKRAREVTRKKSGLEIA
NLPGKLADNTSNDPNISELFIVEGDSAGGSAKQGRSRLTQAILPIRGKILNVEKASMDRI
LANQEIRTLFTALGAGFGADFDVSKARYHKLIIMTDADVDGAHIRTLLLTLFYRYMRPMI
DKGYVYIARPPLYQVRQGKLIKYLDTDEELHDYLGSLQPSPKPIVQRYKGLGEMDAEQLW
ETTMDPENRRLDRVDPEYAKDADEVFEMLMGNEVGPRRKFIEDNAQYVENLDA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaagataacaaattgaagaaggccaagcagtttgaacaagaagctgacaag
tacaatgccagtcagattcaagtccttggcggcctggaagccgtacgcaagcgtccgggg
atgtacattggctcaaccagctcccagggcttgcaccacctggtctgggaaatcatcgac
aacgggatcgacgaagccctggcaggtttcgcgaccaagatcgaagtcaccgtcaacgaa
gacaacagcgtgactgtccaagacgacgggcgggggatcccggtcgacatcgaaaagaag
accggccggccagccgttgaaactgtttatacggttctgcacgccggtggtaagtttggc
ggtggcggatacaaggtttccggcggtctgcacggggtcggggcttccgttgtcaacgcc
ctgtccaccaagctgaacgtcactgtcatgcgggatggcaagaagtactacatcgccttt
gaccacggccgggtcgttgaagagctgaaggaagtcggcacggtgcctttgactgaacac
gggaccatcgtccacttctggccggacccgaacatcttcacggaaaccacggtttttgac
gacaagatcttgaagaaccggatccgggaactggccttcttgaacaaggggctgaagctg
accttcactgacaagcgtaaggacacggcggaaaccgacgtctaccacttcgaaggcggg
atcaaggaatacgtctccttcctcaaccggggccaggaggtactttttgacgagccaatc
tacgtggaaggcaagtacgagggcatcgacgttgaagtatctttgcagtacacgaccggc
tacaagacaaccttgatgacttttgccaacaacatccacacttatgaaggcgggatgcac
gaggcgggcttcaagacagccttgacccgggtgatcaacgactacgcccacaaggccaag
atcttgaaggaaaacgacgacaacctgtccggggaagacatcagggaagggatgacggcc
gtgatttccgtcaagcacccgagcccgcagtttgaagggcagaccaagaccaagctgggc
aactccgacgccagaactgccgttgaccgggccttctcagaaaccttctccactttcttg
atggaaaacccgcaggtggcccgcaagatcgtggaaaaggggcaactggctgaaagagcc
agagttgccgccaagcgcgcccgggaagttacccggaagaagtccggcctggaaatcgcc
aacctgccaggcaaattggccgacaacacttcaaatgacccgaacatctcagaactcttc
atcgtcgaaggggactccgccggcggcagcgccaagcaagggcggagccggctgacccag
gccatcctgcccatccgggggaagatcctgaacgtggaaaaggcctcaatggaccggatc
ctggccaaccaggaaatccggactctgtttacggccctgggggccggctttggggcagac
tttgacgtctccaaggcccgctatcacaagctgatcatcatgactgacgccgacgtcgac
ggggcccacatccggaccctgctcttgaccctcttctaccgctacatgcggccgatgatc
gacaagggctatgtttacatcgcccgtccgcctctgtaccaagtgcgccagggcaagctg
atcaagtacctggacactgatgaagaactccacgactacctggggtcattgcaaccaagc
ccgaagccaatcgtgcagcgctacaaggggctgggggaaatggacgctgagcaattgtgg
gagacgaccatggaccctgaaaaccgccgcctggaccgggtggacccggaatacgccaag
gacgcggatgaagtctttgaaatgctgatgggcaacgaagttggcccgcggcgcaagttc
atcgaagacaatgcccaatatgttgaaaacttggatgcttaa
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