KEGG   Legionella cardiaca: PXX05_13580
Entry
PXX05_13580       CDS       T08869                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
lcad  Legionella cardiaca
Pathway
lcad02024  Quorum sensing
lcad03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lcad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PXX05_13580 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PXX05_13580 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcad03019]
    PXX05_13580 (hfq)
   03036 Chromosome and associated proteins [BR:lcad03036]
    PXX05_13580 (hfq)
Messenger RNA biogenesis [BR:lcad03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     PXX05_13580 (hfq)
Chromosome and associated proteins [BR:lcad03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    PXX05_13580 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: WED42914
UniProt: A0ABY8AR49
LinkDB
Position
complement(3122623..3122868)
AA seq 81 aa
MSKNHLLQDPFLNELRKEKIPVSVFLVNGIKLHGIVDSFDQYVVMLKNSVTQMVYKHAIS
TVVPSRMVKVPTGDEEGNVAD
NT seq 246 nt   +upstreamnt  +downstreamnt
atgtctaaaaatcatctattacaagatcctttcttgaatgaactacgaaaggaaaagatt
cctgtttccgtttttttagtcaatgggattaaattacacggtattgttgactcatttgat
caatatgtcgttatgttgaaaaactcagtaacgcagatggtctataaacatgccatttcc
actgtagtgccctcacgcatggtaaaagtacctactggtgacgaagaaggaaatgtggca
gactaa

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