Lemur catta (Ring-tailed lemur): 123622183
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Entry
123622183 CDS
T08326
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator isoform X1
KO
K15623
protein SSXT
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03082
ATP-dependent chromatin remodeling
lcat05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123622183 (SS18L1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
123622183 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcat03036
]
123622183 (SS18L1)
Chromosome and associated proteins [BR:
lcat03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123622183 (SS18L1)
GBAF(ncBAF) complex
123622183 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
123622183
NCBI-ProteinID:
XP_045384309
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All DBs
Position
17:complement(50091404..50118856)
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AA seq
412 aa
AA seq
DB search
MSVAFATARPRGKGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNMSLGPGALTQSGSSQGLHPQGSLSDAIGTGLPPSSLMQ
GQIGNGPNHVSMQQTAQSTLPTTSMSMSGSGHGTGPGYSHSGPASQTVPMQGQGAIGSYV
SRTNINMPSNPVSMMHQQAATPHYNSAQGGSQHYPGQTSIAMMGQGGQGSSMMGQRPMAP
YRPSQQGSSQQYLGQEEYYGEQYSHGQGASEPMGQQYYPDGHSDYAYQQSSYTEQSYDRS
FEESTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQSYPNQQSYPGQQQGYGPAQGAPSQ
YPSYQQGQGQQYGSYRATQAGPSAQQQRPYGYEQASFLDASRRAHPLCQPPS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggccttcgcgaccgcccggccgagaggcaaaggggaggtcacgcagcaaacc
atccagaagatgctggacgagaaccaccacctgatccagtgcatcctggagtaccagagc
aagggcaagacggccgagtgcacccagtaccagcagatcctgcaccggaacctggtgtac
ctggccaccatcgcagactccaaccagaacatgcagtccctgctccctgccccgcccacc
cagaacatgtcgctgggccccggagcgctgacgcagagcggttccagccagggcctgcac
ccccagggcagcctgagcgacgccatcggcaccggcctgcccccgtcctccctcatgcag
ggccagatcggcaatggcccgaaccacgtgtccatgcagcagacggcccagagcacactg
cccacaacctccatgagcatgtcgggcagcgggcacggcacagggcccggctacagccac
tcgggacctgcctcgcagactgtccccatgcagggccaaggcgccatcggcagctacgtg
tcccggaccaacatcaacatgccatccaacccagtgtccatgatgcaccagcaggccgcc
acgccccactacaactcggcacagggcgggagccagcactacccgggccagacgtccatc
gccatgatgggccagggcggccaggggagcagcatgatggggcagcggcccatggcgccc
taccggccctcccagcaaggctcttcccagcagtacctgggccaggaggagtactacggc
gagcagtacagccacggccagggcgcctcggagcccatgggccagcagtactacccggac
ggccacagcgattacgcctaccagcagtcgtcctacacggagcagagctacgaccggtcg
ttcgaggagtccacgcagcactactacgagggcgggaactcccagtacagccagcagcag
gccgggtaccagcagggcacggcgcagcagcagacgtactcccagcagagctaccccaac
cagcagagctaccccgggcagcagcagggctacgggcctgcccagggagcaccctcgcag
taccccagctaccagcagggccaaggccagcagtacggaagctacagggcgacgcaggcg
gggccctcagcccagcagcagcggccttacggctacgagcaggcaagctttctggatgct
tccagacgcgcccatcctctctgccagcctcctagctga
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