Lemur catta (Ring-tailed lemur): 123630680
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Entry
123630680 CDS
T08326
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcat03021
]
123630680 (SCAF4)
03041 Spliceosome [BR:
lcat03041
]
123630680 (SCAF4)
Transcription machinery [BR:
lcat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123630680 (SCAF4)
Spliceosome [BR:
lcat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
123630680 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
123630680
NCBI-ProteinID:
XP_045396493
LinkDB
All DBs
Position
1:complement(273941899..274001123)
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AA seq
1148 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSELPQATPNSVPTVPQLP
SSDAFAAVAQLFQSTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQP
PEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDAAAVTTTAPAAAVPPVPTTT
MPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMAIPQDPMHHQVPLPP
NGQMPGFGLFPTPPFPPMAQAVIPPTPPVQQPFQASFQTQNEPLTQKPHQQEMEVEQPCI
QEVKRHMTDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQER
RDREKERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIP
PRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTY
IPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPKP
LPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPTFTPPLGIPPPGFGPGVPPPPPP
PPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSI
GNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIG
LQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPP
PHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQQPQQQQQQQQQQQQQQPPP
PQPQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGSR
NDDRDNSNRERREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEENRGKE
KPEVTDRAGGNKTVEPPISQVGNLDTVSELDKGESEATVVKPSGELPAEATSSIEPEKDS
GSAAEAPR
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaggagctcttttcacttatggatatgaaacctccc
atctctagagccaagatgattctcatcactaaagctgctattaaagctattaagctttat
aagcacgtagttcaaatagtagaaaagttcatcaaaaagtgtaaaccagaatacaaggtt
ccgggattatatgtaattgactcaattgtgcggcagtctcgtcatcagtttggaaccgat
aaagatgtttttgggcccagattctctaaaaacataactgccacattccaatacttatat
ctttgtccatctgaagataagagtaaaatagttcgtgtgctgaacctttggcaaaaaaat
ggagtattcaaaattgaaattattcaacctcttttggacatggcagcaggaaccagtaat
gctgccccagtagcagaaaatgttaccaataatgaagggtcaccaccacctccagtaaaa
gtctcttcagaactcccacaagccactccaaactctgtaccaactgtaccacagttgccc
agctctgatgcttttgctgccgtagctcaactttttcagtcaactcaaggccaacagctt
cagcagatccttcagacttttcagcaacctccaaaaccacagtctcctgctcttgacaat
gctgtaatggctcaggttcaggctatcacagctcagttaaagacaactcctacacaacca
cctgaacaaaaagctgctttccccccacctgaacaaaaaactgcatttgacaagaagctg
cttgatagatttgattatgatgatgagccagaagctgtggaagaatcaaagaaagaagat
gctgctgctgtcaccacgacagcacctgctgctgctgtgcctcctgtgcccaccaccacc
atgcccgctgccgctgcccccgctgctgcctcccctcctcctccacaggcaccatttggg
tttcctggagatggcatgcagcagccagcatacacacagcatcaaaatatggatcagttt
cagcctcgaatgatggcaataccacaggatccgatgcaccatcaggttccacttcctcct
aatggacaaatgccaggatttggactttttcctacaccaccgtttcctcccatggctcag
gctgtgattcctcccactccaccagtgcagcagcctttccaagcttcttttcagacacaa
aatgaaccactcactcagaagccacatcaacaggaaatggaggtagaacaaccttgtatt
caagaggttaaacggcatatgactgataacagaaagtcaagatctaggtcagcatccagg
tcaccaaaaaggagacgatctagatctggttctagatctcgaaggtctcgtcatcgccgt
tctcgatctcggtccagagatagacgccgacattctcctcgatctcgatcccaagaaaga
cgggatcgagaaaaagaaagggaacgtcggcaaaaaggccttcctcaagtcaaaccagaa
actgcaagtgtttgcagtactacactctgggtgggacagctggacaaaaggactactcag
caggatgttgccagtctcttggaagaatttggtcctatcgaatcaattaatatgattcct
cccaggggttgtgcctatattgttatggttcataggcaagatgcttatcgtgcccttcag
aaactgagccgaggaaactataaagtgaaccagaaatccataaagattgcctgggcctta
aacaaaggaataaaggcagattataagcagtattgggatgtagaacttggtgttacttat
attccatgggacaaagtcaaacctgaggaactggagagtttttgtgaaggaggaatgttg
gacagtgatacacttaacccagattggaaaggaattcctaagaagcctgaaaatgaagtt
gctcaaaatggaggtgcagaaacctcacacacagaaccagtatcacccatacctaaacct
ctgcctgtacccgtccctcctattcctgttcctgcacctataacagtaccacctccacag
gtcccaccacatcagccaggtcctcctgtagttggtgctctccagccacccactttcaca
ccccctttgggaattcccccaccaggctttggtcctggtgttcctcctcctcctcctcct
ccaccatttttgcgcccaggattcaacccaatgcatttaccaccaggttttcttcctcct
ggacccccacctcctataactccaccggtatccattcctcctcctcacactccaccaata
agcatcccaaactccactatcgctggtataaatgaagacactacaaaagacttatctatt
ggaaatcccattccaacagtggtgtctggggctagaggaaatgccgagtctggtgacagt
gtgaaaatgtatggctctgctgtgccacctgctgcacccacgaatctgcccacccctcct
gtaacccagcctgtttcacttcttggcactcaaggagttgcccctggtcctgtaattggg
ctccaggcaccatctactggtcttcttggtgcccgacccggcctcatcccgcttcagcgc
cctccaggaatgcctccacctcacctacagcgattccctttgatgccacctcgacccatg
ccaccgcacatgatgcacagaggtccgccaccagggccagggggctttgccatgcctcca
cctcatggaatgaaaggtccctttccaccgcacggcccctttgttcggcctggtggaatg
ccagggctcgggggcccagggccgggcccagggggtcctgaagacagagatgggagacag
caacaaccgcagcagcagcagcagcagcagcaacagcagcaacagcaacagccgccccct
ccacagccacaacagcaacagccgccaccgtcacagcagccgccaccaacccagcagcag
ccacagcagtttagaaatgataacaggcagcagttcaattcaggtagagaccaagaaaga
tttggaagaagatctttcggaaatagggtggaaaatgaccgggaacggtatgggagccgt
aatgatgatagagataatagtaatcgtgaaaggagagagtggggaagaaggagccctgac
cgggacaggcacagagacttggaagagaggaatagacgctctagcgggcatcgagacaga
gagagagattctagagatagagagtctcgtagagaaaaggaagaaaaccgaggaaaggaa
aagcctgaggtgacagacagggcaggtggtaacaaaaccgttgaacctcccattagccaa
gtgggaaacctagacactgtttcagaacttgataagggggagtctgaggccacagttgta
aaaccttctggagagttacctgctgaagctacctcatccattgaacctgaaaaggattct
ggctcagcagcagaggctcctcgttag
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