Lemur catta (Ring-tailed lemur): 123633430
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Entry
123633430 CDS
T08326
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123633430 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcat03019
]
123633430 (PNLDC1)
Enzymes [BR:
lcat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
123633430 (PNLDC1)
Messenger RNA biogenesis [BR:
lcat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123633430 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
123633430
NCBI-ProteinID:
XP_045400639
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All DBs
Position
2:140655844..140673737
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AA seq
531 aa
AA seq
DB search
MDVGADEFEESLPLLQELILDADFVGLDIEFTGLRSNLTGPQQISLFDLPSEWYLKTRQS
VQQFTICQIGLSVFSSVERESNKYVAHSCNFFLFPTTFGILDSEFSFQASSVQFLNHYGF
NYNKFLKNGIPYMNEEQEKKIKHNILCGNWKVRSSLDKDQIKVVIDEVTRWLDLAEEGEW
MTLPGIAGFQAFEVELVLRQALPNIWTVLNEQGVIVKKVSKQHRWYLENTSCDRASCWRD
KILLSAKGFSVFFQMLVKAQKPLVGHNMMMDLLHLHEKFYRPLPESYDQFKQNIHSLFPV
IIDTKNVTKDIWKELNFPRVSNLSEVYEVLNSNLNPTKNSGPEIMHSHDCEKYVETKYPH
EAAYDAFLCGSVLLKVAHLLLEKVHGIDPIPESTFPQYLDVLAPYVNQVNLIRAGVPKIN
FSGPDYPSIRPPILILSVRKWPGVNEQQVYREFQNLCKFDVRRLTRSQFLLLTNKFKDAR
NILKEYRRHPTLQVSLYRYWKHSPNINCLLQVCGIVTTWALLAFILGRSGP
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgggcgccgacgagttcgaggagagcctccctctgctgcaggagctcattctg
gacgccgacttcgtgggtctggacatagagttcactggccttcgttccaacctgaccggg
ccccagcagatcagtctttttgatttgccatcggagtggtatctaaagacccgtcagagt
gttcagcaatttacaatctgtcagattgggttgtctgtgttctctagcgttgaaagagag
tcaaacaagtatgtagcccattcgtgtaacttctttctcttccctacaacatttgggatt
ttggattcagaattctctttccaggcttctagtgttcagtttttgaatcactatggcttc
aactacaacaagtttctcaaaaatggaatcccatatatgaatgaagaacaggagaagaaa
attaagcacaacattctgtgcgggaactggaaagttcgcagctctctagataaagaccaa
atcaaggtggtaattgatgaagtgacgcggtggctggacctggctgaggaaggagaatgg
atgactcttccgggtatcgctgggttccaggccttcgaggtcgagctggtgctgaggcag
gccctccccaacatctggaccgtgctgaacgagcaaggggtgatagtgaagaaagtgagc
aaacagcatcgctggtatcttgagaacacctcttgtgacagagcaagctgctggagggat
aagattcttctctctgcgaagggtttttctgtgtttttccaaatgctggtgaaagcccag
aagcccttagtgggacataatatgatgatggatctgttgcatctccacgagaagttctac
agacctctcccagaaagctacgatcaatttaagcagaacatccacagcctatttcctgtt
atcattgacaccaagaacgtgacaaaggatatctggaaggaactgaatttcccaagggtt
tccaacctttcagaagtgtatgaagtcctgaacagtaacttgaatcccaccaagaattct
ggaccagagattatgcactcacatgattgtgaaaaatatgtcgagacaaagtacccccac
gaggctgcatatgatgccttcctttgcggatcagttcttttgaaagtggcacacttgctc
ctagagaaggtgcatggcatcgatcccataccagagtccacctttcctcagtaccttgac
gtgctggccccttacgtgaaccaagtgaatcttatccgagctggggtccctaaaatcaat
ttttctggtccagattatcccagtatccgacctcccatcctcatcctcagtgtcagaaag
tggcctggggtcaacgagcagcaagtctaccgtgagtttcagaatctctgcaagttcgac
gtcaggcgcctcacgcgaagccagttcctgctcttgaccaataagttcaaggacgcgcgg
aatatcctgaaggaatacaggcgccacccgaccctgcaggtctccctgtatcggtactgg
aaacactccccaaacatcaactgcctgttacaagtctgtggcatagttaccacctgggcc
ctcctcgccttcatcctgggaagatccggcccgtga
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