Lemur catta (Ring-tailed lemur): 123643847
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Entry
123643847 CDS
T08326
Name
(RefSeq) collagen alpha-4(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04151
PI3K-Akt signaling pathway
lcat04510
Focal adhesion
lcat04512
ECM-receptor interaction
lcat04820
Cytoskeleton in muscle cells
lcat04974
Protein digestion and absorption
lcat05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
123643847
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123643847
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123643847
09142 Cell motility
04820 Cytoskeleton in muscle cells
123643847
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
123643847
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
123643847
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcat04147
]
123643847
00536 Glycosaminoglycan binding proteins [BR:
lcat00536
]
123643847
Exosome [BR:
lcat04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123643847
Glycosaminoglycan binding proteins [BR:
lcat00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123643847
Hyaluronan
Extracellular matrix or blood plasma proteins
123643847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Kunitz_BPTI
VWA_CoxE
DUF1194
SRPRB
DJ-1_PfpI
DUF3865
MoCF_biosynth
Motif
Other DBs
NCBI-GeneID:
123643847
NCBI-ProteinID:
XP_045415646
LinkDB
All DBs
Position
1:163980525..164086218
Genome browser
AA seq
2131 aa
AA seq
DB search
METWKMFWGIVFLAASFGFIESQRIVCREASAGDVVFLVDSSISPQDARSVRNFLYILVN
SFNVSRETVRVGLAQYSDVPHSEFLLSTYHRQGNVLRHIQQLQFKPGGKKMGLALQFILD
HHFQEAAGSRASQGVPQVAMVISSGPAEDHVRGPAEALKRAGVLLYAVGIRDAVWAQLRE
IASSPQENFTSFIPNFSGLGSLARKLRRELCATLAKAAQSVDHISPACREAALADIVFLV
DSSTSIGPRNFQKVKNFLYSVVLGLDISSDQVRVGLAQYSDSIYPVFQLNQYPLKSMVLE
QIQNLPYRTGGTNTGSALEFIRTNYLTEAAGSRAKDRVPQIVILVTDGESNDEAQEAADQ
LKEDGVVVYVVGVNVQDVQELQKVASEPFEQFLFNTENFNILQDFSGSILQTLCSAVEGK
IKEFTKTYADVVFLADTSQGTSRASFQSMWNFISRVVGMLEVGKDKYQIGLAQYGDQGHT
EFLLNTYKTQHEMITHINEHFVPRGGSRRTGKALRYLHPTFFQEQAGSRFLQGIPQYVVV
ITSGKSEDEVQDAAQRLRKKGVKVMSVGVQDFDRTELEGMGAPDLVYEMQGEDRVRQVTQ
DVTMVMQGTVDLGFRIQAVETVEACPTAIPADLVFLIEEFSRARQANFPQVVDFLKTTVS
SLSSRPDVVRIGLVFYNEEPHLEFSLDTFQSPATILAHLNKLTYRGRRGSTKTGAALDFL
REEVFIQEKGSRSSHGVQQIAVVITEGFSQDDVSRPASRFRRAGVTIYTVGTQHASDSKD
LEKIASYPPGQHAITLESFLQLSVVGSMLTDQLCPEAVGKTAFVPSAPQEGCVHVADIYF
LIDGSGSIYPEDFLEMKIFMNEVIKMFQIGPDKVQFGVIQYSDQIKSKFILSQYPNVAEL
KEAIDDIRQGGGGTKTGEALKNMTQVFADTARINVNRYLIVITDGKSSDSVVEAAEELRG
NGIIIYAVGIKNANTKELKEIAKDKYFFVHEFDLLKDTQKELVQQICSETCKEADIIFLI
DGSESISPEEFENMKGFMEKMVNQSNIGADKIRIGLLQFSSAPQEEFRLNQYSSRKDICR
AISKVQQLNDGTRTGKALNFTLPFFDSQRGGRPSVHQYLIVITDGLAQDNVAIPAKALRD
RNIIIFAIGVGEAKKSQLWEITNDWDKVYHKQNFQSLENLEKDILYKACNPEGCNIDLFI
GLDISTPSNQVQQKLQRLLPGVIEQLALLPNISCVIPDQINPRFRYLVPGPNGQLIFDSD
FEKYSDELIQKFLAKNSYMNVNFLKSLGENALHSSSAKVKVILVFTDGLDDDLEKLKETS
ELLRKDGLSGLLIIGLEGVHKLEELQELEFGRGFAYKQPLSIKLQSLPNVLLKQGERGPQ
GLPGLRGEEGCPGMRGPPGARGFSGEKGNPGEEGVDGLDGEQGSYGVPGSSGEKGNRGNQ
GLPGLPGPPGESGEPGLRGDPGEPGFPGYLGAQGEDGDPGHEGKKGAKGVRGKRGNAGFP
GFAGTPGDQGPPGQTGIKGPKGLADMTPCKIVDFMRENCPCAKGISKCPAFPTEVVFALD
MSKDVSQLDFERMRGILLSLLMKMEISESNCPTGARVAIVSYNTKTDYLVRFSDYKRQRA
LLEVVRKIPLERSLGRRNLGATMMFVARHVFKRVRSGLLMRKVAVFFQAGWAYDAASISM
ATLELGAGDIIPVVITFVEEHNLPDALLMDDRFHLFTWETEHQQDVDRMARCTVCYDECR
PAPECGSAWPRAADVDLALVVDGSRGVRAAVYRGALGLVDAVLDDLEVAAEPGASPGGAR
VALVTHTTPGFWPGGGRSPVLEGFHLTSYGQRTQMQRRVREAAGRPPQGAPALGHALEWT
LEKVLLAAPLPRRAQVLFAIVASETSSWDREKLRTVSLDAKCKGLTLFVLAVGPSVGARE
LAELAQVASAPSEQHLLRLEGVSEPEVVYARGFTRAFLNLLKSGTNQHPPPELTAECEGR
NRGDTLRQSGMPIERSPNRQFGVSGIADDLEALEATDIFLEEKRRGMTTPTTPQEALENY
ENDEYDIEKNEQETPARQKDTRKERNLGTAYGPCSMDPMEGECQDYTLKWYYNREERACQ
QFWYGSCGGNANRFETREECEAQCDPTSLQS
NT seq
6396 nt
NT seq
+upstream
nt +downstream
nt
atggagacttggaagatgttttggggaatcgtcttccttgcagctagttttggcttcatc
gagtcacaaaggattgtctgcagggaggcctctgcgggagacgtcgtgtttctggtggac
tccagcatcagcccccaagatgcccgcagtgtgaggaacttcttgtacatcctagtgaac
agcttcaacgtcagcagagagaccgtccgtgtgggtctggcccagtacagtgacgtgcct
cattcggagttcctgctctccacctaccaccgccaaggcaacgtgttgagacacattcag
cagctgcaatttaagcctgggggcaagaagatgggcctggccctgcagttcattctagat
caccacttccaggaagcagcagggagccgggcaagccaaggggtgcctcaggttgccatg
gtgatcagcagtggcccagctgaggaccatgtccgtggacctgccgaggcattaaagagg
gcaggcgtcctgctttatgccgttggcatcagagatgcagtttgggcacagctcagggag
attgccagtagtccccaggagaatttcacctcctttattcccaacttctctgggctgggc
agtctcgcccggaagctgcggcgtgagctctgtgctactttggcaaaggcagctcaatct
gttgaccacatctctccagcttgcagagaagcagccctggcggacattgtgttcctagtg
gacagctcaaccagcatcggaccccggaactttcagaaggttaagaacttcctttactcc
gttgtcttggggcttgacatcagcagtgaccaggtccgagtgggacttgcccagtacagt
gacagtatctacccagtctttcagctgaaccaataccctctgaagagcatggtcttggag
cagatccagaatctgccctaccgcacgggaggcacgaacacggggagcgccctggaattt
atcaggactaactatttgactgaagcagctggcagcagggccaaggacagagttcctcag
atagttatcctggtgacagatggggagtcaaatgatgaggcccaggaagcagctgatcag
ctgaaagaagatggagttgttgtgtatgtggtaggagtcaacgtccaggatgtccaggag
ttgcaaaaagtagccagtgagccatttgagcagtttctctttaacactgaaaacttcaac
atcctgcaggatttctcgggaagtattcttcagactttgtgctccgcggtggagggtaaa
ataaaagaattcaccaagacctatgcagatgtggtctttcttgctgacacctcgcagggc
acatcacgggccagtttccagtccatgtggaatttcatctccagagtggttggcatgctg
gaggtcggcaaggataagtaccagattgggctggctcagtatggtgatcaaggtcacact
gagtttttgctcaatacctacaagacccagcatgagatgatcactcacataaatgagcac
tttgtgcctcgaggtggctctagaaggacaggcaaagctctgcgataccttcatccgacc
ttcttccaggagcaagcaggaagccggtttctccagggcattcctcagtatgtggtagtc
attacctcgggcaaatctgaggatgaggtccaggatgctgcacagagattgaggaagaaa
ggcgtgaaagtcatgtctgtgggtgtgcaggactttgacaggacagaactggaagggatg
ggggccccagaccttgtatacgagatgcagggagaagacagagtcagacaggtaacacag
gatgtgactatggtaatgcaaggaactgtagatctgggcttcaggattcaggctgtggag
actgtagaagcatgtccaactgctatcccagctgacttagtgttcctcattgaggaattt
agcagggctaggcaagccaattttccacaagttgtcgatttcctaaagaccactgtcagc
tctctaagcagtcgtcctgatgttgtgagaattggcttagtcttttacaacgaggaacca
catcttgaattttcactggatacatttcagagtccagccaccatcttggcacatttaaac
aaattaacctaccggggaagaagaggaagtacaaagactggtgctgctttagatttccta
agggaggaggttttcattcaggagaagggcagccggtccagccacggtgtacagcagata
gctgtggtcatcacagaaggcttctcccaagatgacgtgtccagacctgcttctcgcttt
cggagggcaggggtcaccatctacacagtgggtacccagcatgcctcagacagtaaggac
ctggagaagatagcgtcgtatcctcctgggcagcatgccatcaccctggaatcctttttg
caactctccgtagtgggaagcatgcttacagaccagctctgccctgaggctgtgggcaaa
acagcttttgttccttctgccccacaagaaggttgtgtgcatgttgcagacatttacttc
cttattgatgggtctggcagtatctacccagaagattttcttgaaatgaagatattcatg
aatgaggtgataaagatgttccagatcgggcctgacaaagtacagtttggagtcattcag
tactcagatcaaattaaaagtaaatttatcctcagccagtaccccaatgtggcagagctg
aaggaagccattgatgacatccggcaggggggagggggcaccaaaacgggggaggccttg
aaaaacatgactcaggtctttgcagacactgcccgaatcaatgttaatcgatacctcata
gtcatcactgatggtaaatcttcggactctgtggttgaggctgcagaagaattgagggga
aatggaatcatcatttacgctgttggaataaaaaatgctaacaccaaggagcttaaagaa
atagctaaagacaagtatttttttgtgcatgagtttgatttattgaaggatacgcaaaaa
gaattagtacagcagatctgctcagagacctgtaaggaagctgacattatcttcttgata
gatggttcagaatccatctccccagaagaatttgaaaacatgaaaggattcatggagaaa
atggtgaaccaatctaatattggtgctgataaaattcggattggccttttgcagttcagc
tcagccccccaggaagaattcagactcaaccagtactcttcaaggaaggacatttgcaga
gccatctcgaaggttcagcagctgaatgatggcacccgcactgggaaagccctgaatttc
actctgcctttttttgacagtcaaagaggagggagacccagtgttcatcaatatttgatt
gtgatcaccgatgggcttgcccaggataatgtagccataccagccaaagccctcagggac
agaaacataattatttttgccattggggtgggagaagccaaaaaatctcagctttgggag
atcactaatgactgggacaaagtataccataaacaaaattttcagtccctggagaacctg
gagaaggacattctttataaggcctgcaatcctgaaggatgcaacatagatttgtttata
ggacttgatatctcaactccttcaaatcaagttcagcagaagcttcaaaggttactgcca
ggggtgatagaacagttggccttgcttcctaacatcagttgtgtcattcctgatcagatc
aacccgaggttccgctacttggttcctggcccaaatggccagcttatctttgactcagac
tttgagaaatacagtgatgagctcatccagaagttcctggccaagaatagctatatgaat
gtgaattttctgaagtccctgggagagaatgctctccattcctcttctgctaaagtgaag
gtcattttagtgtttacagatgggctggatgatgatttagagaaactgaaggaaacgtcg
gagcttctgcgcaaggacggattgtctggacttctaataattggcctggaaggtgtgcat
aagttagaagagctccaggagctagaatttggcagagggtttgcatataagcaacctttg
agcatcaaactacaatccctcccgaacgtcttactgaagcaaggagaaagaggccctcag
ggtcttcctggactccgaggtgaggaaggatgcccgggtatgaggggacctccgggagca
agaggattttcaggagagaagggcaaccctggtgaggaaggtgtggatggcttggatgga
gaacagggtagttatggagttccagggtcatctggagaaaaaggaaatagaggaaatcag
ggcttgccgggactgccaggaccacctggagagagcggagagcccgggttaaggggagat
cctggtgaacctggattccctggctatcttggtgcacaaggagaagatggtgacccagga
cacgaaggaaagaagggagcaaaaggagtcagagggaagaggggtaatgctggctttcct
ggatttgctggaactccaggtgaccaaggcccaccgggacaaacgggcatcaaaggtccc
aaaggtttggcagatatgacgccttgcaaaattgttgatttcatgcgagaaaactgccct
tgtgcaaaaggtatttccaaatgtccagcgttcccgactgaagtagtctttgccttggac
atgtcaaaggacgtctcccagctggattttgagaggatgagaggcattttattatctctg
ttgatgaagatggaaataagtgagagtaactgcccaacaggtgcccgagtggccatcgtt
tcctacaataccaaaacagattacctggttcgtttctcagactacaagaggcagcgtgca
ctcctggaagttgtcaggaaaatccccctggagcggtcattgggccgcaggaacctcggg
gccaccatgatgtttgtggcgagacacgtgttcaaacgtgtgcgctcgggccttctcatg
aggaaggtggctgtgttcttccaggcaggctgggcctatgatgcagcctccatcagcatg
gctacactggagcttggtgcaggggacatcatccctgtggtcatcacctttgtggaagag
cacaacctcccagatgccctgctgatggatgacagatttcacttgttcacctgggagacg
gagcaccagcaggatgtggaccgcatggctcgctgcactgtctgctacgacgagtgccgc
ccagctccggaatgcggctcggcctggccgcgggcggcggacgtggacttggcgttggtg
gtggacggctcccggggcgtgcgcgccgccgtgtaccgcggagctctgggtctggtggac
gccgtgctagacgacctggaggtggccgcagagccaggcgcgtcgcctggtggggcgcgc
gtggccctggtgacgcacacgacgccgggcttctggccgggcgggggtcgctcacctgtg
cttgagggcttccacttgacctcctatggtcaacggacgcagatgcagagacgtgtccgt
gaggccgccggccgccccccgcagggagcccccgccctgggccacgctctggagtggacg
ctggaaaaggtgctcctggcagcccctctgccgcggagggcacaggttctctttgccatc
gtggccagcgagacgagcagctgggacagggagaagctaaggaccgtgtctctggatgcc
aaatgcaagggcctcaccttgtttgtgctggccgtgggccccagcgtgggggcccgtgag
ctggccgagctggcccaggtggccagtgccccttccgagcagcacctgctgcgcctagaa
ggggtctcagagccggaggtagtctatgcccggggattcacgcgagctttcctgaacctc
ctaaaaagtggaacaaaccagcacccacccccagagcttactgcagaatgtgagggccga
aaccgtggggacactctgcggcaatcaggcatgcctatcgaaaggtcacccaatcgccaa
tttggtgtgtctggcattgctgatgatttggaagcacttgaagcaacagacatttttcta
gaagagaagagaagaggcatgacaacacctacaactccgcaagaagcgcttgaaaattat
gaaaatgacgaatatgacattgaaaaaaatgaacaagaaacaccagcaagacaaaaagac
actagaaaagaaagaaatttaggcactgcctatggtccttgttccatggatccaatggaa
ggcgagtgccaggactacaccctgaagtggtactacaacagggaagagcgggcttgccag
cagttctggtacggcagctgtgggggcaatgccaaccgctttgaaaccagggaagaatgt
gaggctcagtgtgacccaacatccctacagagttag
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integrated database retrieval system