Lates calcarifer (barramundi perch): 108872464
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Entry
108872464 CDS
T04895
Name
(RefSeq) crooked neck-like protein 1 isoform X2
KO
K12869
crooked neck
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108872464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108872464
03036 Chromosome and associated proteins [BR:
lcf03036
]
108872464
Spliceosome [BR:
lcf03041
]
Complex B
Other components
Prp19-related factors
108872464
Complex C
108872464
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
108872464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_CcmH_CycH
TPR_17
Mad3_BUB1_I
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
108872464
NCBI-ProteinID:
XP_018515661
UniProt:
A0A4W6FRY4
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All DBs
Position
LG7_1:complement(1904007..1913220)
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AA seq
760 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDEEELND
YKLRKRKGFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDHRNITLWLKY
AEMEMKSRQVNHARNIWDRAITILPRVNQFWYKYTYMEEMLGNVAGCRQVFERWMEWEPD
EQAWHSYINFELRYKEVDKARTIYERFVIVHPEVKNWIKYARFEEKHGYIAHSRKVYERA
VEFFGEEHVDENLFVAFAKFEETQKEFERVRVMYKYALDRIPKHQAQELFKNYTMFEKKF
GDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADPDTVREVYERAIANIP
PIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKIWLLYSQF
EIRQKNLQGARKVMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLYEKYLEFSPENCTT
WIKFAELETILGDIDRARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEFGNTRNLYKRL
LQRTQHVKVWISYAKFELSIDSPDRLQKCRQIYEEANKSMRSCEEKEERLMLLESWREFE
REFGSDSTRERVRKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMA
KMWKKQQQQATDDDDDGEVVPEKGPAAEETTSLRSQEPVASPENDQLENGSDRNTVTETE
QKTYDDRDDDDSSSSDSESEDNDGGEKKEKESRSSEEDKE
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacagcggcaggcaaacagcggataccgaaggtggcgaaggtgaagaataaa
gctcctgcagaggttcagatcactgcagagcagctgctgagagaagccaaagagagggag
cttgaacttctgccaccaccgccaaaacagaagatcactgatgaggaggagctgaatgat
tacaaactgaggaagaggaaggggtttgaggacaacataaggaaaaatcgcactgtcatc
agtaactggattaaatatgcacaatgggaggaaagcctgaaggagatccagagagctcgt
tccatttacgagcgagcgctggatgtcgatcaccgcaacatcacactgtggctgaaatat
gccgagatggagatgaagagccggcaggtgaatcacgcccgcaacatctgggacagagcc
atcaccatcctcccacgagtcaaccagttctggtacaagtacacttacatggaggagatg
ctggggaacgtcgccggctgcaggcaggtgtttgagcgctggatggagtgggagcccgat
gaacaggcctggcactcctacatcaactttgagctgcgctacaaggaggtggacaaagct
cgcaccatttatgagcgatttgtcatcgttcaccccgaagtgaagaactggatcaaatat
gctcgttttgaggagaagcacggctacatcgctcacagcaggaaggtgtatgagagggcg
gtggagttcttcggagaggagcatgtggatgaaaacctgtttgtggcctttgccaagttc
gaggagacacagaaagagtttgaacgagttcgggtgatgtataagtacgctttggacaga
atccctaaacaccaggcacaggagctcttcaagaactacacgatgtttgagaagaagttt
ggagaccgcaggggaattgaggacgtcatcgtcagcaaacgaaggttccagtacgaggag
gaggtcaaggcgaacccacacaactatgacgcttggttcgattacctgcgtctggtggag
agcgacgccgaccccgacacagtgagggaggtttacgagagagccatcgccaacatcccc
cccatccaggagaagagacactggagacgatacatctacctgtggatcaattacgctctg
tatgaagagctggaggtcaaggatcctgagagaacgagacaggtgtaccaggcctgtctg
gatctcatccctcataaaaagttcacttttgctaagatctggctgctgtactctcagttt
gagatccgacagaagaacctgcagggagctagaaaggtcatgggcacagcgatcggtaaa
tgtccgaagaacaaactgctgaagggctacatcgagctcgagctgcagctgcgtgagttt
gaccgctgcaggaaactgtacgagaaatacctggagttcagtccggagaactgcaccacc
tggatcaagtttgcagaactggagacaatcctgggagacatcgacagagcccgcgccatc
tttgaactcgccattggacaaccgcgactggacatgccagaggttctgtggaagtcctac
attgactttgagattgagcaggaggagtttggaaacacaaggaacctttacaaacggctg
ctgcagcgcacccaacacgtcaaggtttggatcagctacgccaagttcgagctgtcgatc
gacagccccgacaggctgcagaagtgccggcagatctacgaggaggccaacaagagcatg
aggagctgcgaggagaaggaggagcggctgatgctgctcgagtcctggagggaatttgag
agggagtttggctccgacagcaccagggagagagtcaggaagctgctgccagagaaggtg
aagaagaggaggaagctgacagcagaggacgggtcggacgcaggctgggaggagtactac
gactacatcttcccagaggacgccgccaaccaacccaacctcaagctgctggccatggcc
aagatgtggaagaagcagcagcagcaggcaacagacgacgacgacgacggggaggtggtt
ccagaaaaaggtccagcggctgaggagacgacatcgctgcgctctcaggaacctgtagct
tctcctgaaaacgaccagctggagaacggctccgacaggaatactgtgactgaaacagag
cagaagacgtacgacgaccgagacgacgacgacagcagcagcagtgacagtgagagtgag
gataatgatggtggagagaagaaggagaaggagagcaggagcagtgaagaagataaagag
tag
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