Lates calcarifer (barramundi perch): 108873453
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Entry
108873453 CDS
T04895
Symbol
eef1a1a
Name
(RefSeq) elongation factor 1-alpha 1a
KO
K03231
elongation factor 1-alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108873453 (eef1a1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108873453 (eef1a1a)
03016 Transfer RNA biogenesis [BR:
lcf03016
]
108873453 (eef1a1a)
03012 Translation factors [BR:
lcf03012
]
108873453 (eef1a1a)
04131 Membrane trafficking [BR:
lcf04131
]
108873453 (eef1a1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108873453 (eef1a1a)
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
108873453 (eef1a1a)
Transfer RNA biogenesis [BR:
lcf03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108873453 (eef1a1a)
Translation factors [BR:
lcf03012
]
Eukaryotic type
Elongation factors
108873453 (eef1a1a)
Membrane trafficking [BR:
lcf04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
108873453 (eef1a1a)
Exosome [BR:
lcf04147
]
Exosomal proteins
Proteins found in most exosomes
108873453 (eef1a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Gtr1_RagA
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
108873453
NCBI-ProteinID:
XP_018517141
UniProt:
A0A4W6DX00
LinkDB
All DBs
Position
LG16_LG22:15577730..15583252
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEPSPNMTWFKGWKINRKEGNASGTTLLEALDAIQPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPVNVTTEVKSVEMHHEALT
EALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPQEAANFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVDMIPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKGVEKKVSTTGKITKSAQKAQRNK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggagaaactccacatcaacattgttgtgattggccatgtggactctggcaag
tccaccaccacaggccacctgatctacaagtgtgggggaatcgacaagagaaccatcgag
aagtttgaaaaggaagctgctgagatggggaaagggtcgttcaagtacgcctgggtgctg
gacaagctaaaggcagaaagggagcgtggtattaccatcgacatctcactgtggaagttt
gaaaccagcaagtactatgtgaccatcatcgatgccccaggtcacagggacttcatcaag
aacatgatcactgggacctcacaggcagattgtgctgtactgattgtggcagctggtgtg
ggagagttcgaggcaggtatttccaagaatggacaaacccgtgagcatgccctcctggcc
tacactctgggagtaaagcagctcatcgtgggcatcaataagatggactccacggagcca
aactacagccagaaacgctatgaggaaattgtgaaggaagtgagcacctacatcaagaag
attggctacaatccagacactgttgcctttgtacccatttcaggatggaatggagacaac
atgcttgaacccagccccaatatgacttggtttaaagggtggaagatcaataggaaagaa
ggcaatgcatcagggaccactctacttgaggctctggacgctattcagcctcccacccgt
ccaacagacaaacctctacgtctgcccctgcaggatgtctacaagattggaggtattgga
actgtgcctgtaggccgtgtggaaactggcatactaaagcctggcatggtggtgactttt
gcccctgtcaatgtgaccactgaggtgaagtctgtggagatgcaccatgaggcgctgact
gaagccctccctggggacaatgtgggctttaacgtcaagaacgtgtccgtcaaagatatt
cgccgtggcaatgtagctggcgatagcaagaatgacccaccacaggaagctgccaatttc
actgctcaggtgatcatacttaatcacccaggtcagattagtgctggttatgctcctgtg
ctggactgtcacaccgcccacatcgcttgcaagtttgctgagctcaaggaaaagattgat
cgccgctctggcaagaagctggaggacaatcccaaatccctcaagtctggagatgctgcc
attgtggatatgattcctggaaagccaatgtgtgttgagagcttctctgagtaccctcca
ctgggtcgttttgctgttcgtgacatgcgtcagactgtggctgttggtgtgattaagggc
gtggagaagaaggtctccaccactggtaaaattactaagtctgcccagaaagcccagagg
aacaaatga
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