Lates calcarifer (barramundi perch): 108874037
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Entry
108874037 CDS
T04895
Name
(RefSeq) semaphorin-4D isoform X1
KO
K06521
semaphorin 4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lcf04090
]
108874037
CD molecules [BR:
lcf04090
]
Proteins
108874037
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
ig
I-set
Ig_3
Ig_2
Motif
Other DBs
NCBI-GeneID:
108874037
NCBI-ProteinID:
XP_018517909
UniProt:
A0AAJ7LC37
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Position
LG9:13444070..13481015
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AA seq
907 aa
AA seq
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MYQYSLADAMTDKGNFTVPKLSESNMGFGVLGVFLGLLLEVSTHGPHAVPRTSWRHQDLD
LMEFSEPGIFNYSTLLLNEKRDALYVGAREAIFELSKKNVTVRNNKVEWTVAESPMMMCT
LKGKSKERDCLNYIRVLQLVDDEQLYVCGTYAFQPQCDYLNLADFSLNGRPEDGRGKCSF
DPSQSFTTVMVDGALYSGTAYNFLGSEPIISRYSPHQSLLRTEYSTSWLNEPSFVYADVI
REGRNRAYGEDDKIYYFFTEVSVEYEFFGKLLIPRVARVCKGDLGGQRTLQKKWTSFLKA
KLVCSMPELNFVFNVVHDVFILKESDWRDTVIYGVFTSQWGNVGLSAVCAYNMTAVEDVF
SKGKYMQKATVEQSHTKWVRYNGITPSPRPGACINNVMRQQNITSSLHLPDKTLQFVKDH
PLLEDPILPIGNGPRLITKDVNYTQIVVERVRALDGNIYDVIFTGTDKGVLHKSVVFEGD
VHIVEEIQLLKNQEPIKNLLLSSETRSLYAGSDWGVVQSPTAFCSRYPSCSDCVLARDPH
CAWDRHTSACVNILDAPNQRSRKLIQNLNGDADKCPTVPGLSLKDYQHVTVKPGSSVELP
CLVHSNLAQVMWKSNSSVLTEASRFHLIGENGLLIYSVAPEDQGHYECWSVEWAPAVGKN
FSRLLAGYILSLDLPPRPPQQAGHVTTTLSNQETSSTHTAEGNVETDRDPLTSALAPPSF
TATVLFTSPPQTDSSLTPPPSSTIKFQPKHLPSSNAPRPDSRDPAAEYLQHNNSIALLFL
FLLFFLLFLAALAYNCYMQYLPAPCLRMRAALLGSHKSTHQPEYRACEAGLMEAPASDKI
NMTEQPTQNGSQTTQNLRALRDTGYETEPECGNGRIPSHSFGDDSPSQEKPFDVDCESQP
IQFADAD
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagtattcgctagccgacgccatgacggacaaaggaaactttacagttccaaag
ttgtcagagtctaatatgggatttggcgtgctgggagttttcctggggctgctgctggag
gtctctacccacggaccccatgctgtgcccagaacttcctggagacaccaagatttagat
ctgatggagttttcagagcctgggatcttcaactactctacgttgttgctgaatgagaag
agggatgcactgtatgtgggagccagggaggccatctttgagctcagcaagaagaatgtg
actgtcagaaacaacaaggttgaatggacagttgcagaaagccccatgatgatgtgcaca
cttaaaggaaaatcaaaagagagggattgtctaaactacattcgagtgctccaactcgta
gacgacgagcagctgtatgtctgtggcacatatgcctttcaacctcagtgtgattacttg
aaccttgctgacttttcattgaatggccgacctgaagatggcaggggaaaatgctccttt
gacccctcacaaagctttaccactgtcatggttgatggagcgctgtactcaggaacagct
tataacttcttaggcagtgaaccaatcatttccagatactctccacaccagtccctgtta
aggacagagtactccacatcatggctcaatgagcccagttttgtttatgccgacgtaatc
agagaagggagaaacagagcatatggtgaggacgacaaaatctattacttcttcacggag
gtgtcagtggagtacgaattttttggcaagctgctcatccccagggtggcgcgcgtctgt
aagggcgaccttggggggcagcgcactctgcaaaagaaatggacatcctttctaaaagcc
aaacttgtgtgctccatgcctgagctcaactttgtcttcaacgtcgtgcacgatgtcttc
atcctgaaggagtcagactggagggacaccgtcatctacggcgtctttacctcccagtgg
ggtaatgtgggcctgtcagctgtgtgtgcctataacatgactgcagtggaagatgtcttc
tccaagggcaagtacatgcagaaggccacagtggagcagtcccacactaagtgggtgcgg
tacaatggcatcactccttccccacgtcctggagcatgtattaacaacgtgatgcgacaa
cagaacattaccagctctctccacctgccagacaagacccttcagtttgttaaggaccac
cccctgctggaggatcccatcctgcccatcggcaacgggcctcgcctcatcaccaaagac
gtcaactacactcagatcgttgtagagagggtccgagcgctcgacgggaacatttatgat
gtgatcttcactggaacagataagggagtcctgcacaagtcagtggtgtttgaaggagac
gttcacattgtggaagagatccagctcctgaagaaccaagagcccatcaagaacttactg
ctgtcctcagagacacgatccctgtatgccggctcagactggggcgtcgtccagtcaccc
acagccttctgcagcaggtatccgtcctgcagcgactgtgtcctggcacgagacccccac
tgcgcctgggaccgtcacacctctgcctgcgtcaatatccttgatgctcccaaccaacga
tccaggaagttaatccagaacctgaatggtgacgcagacaagtgtcctacagtgccaggt
ctgtctctgaaggactaccagcatgtgacagtgaaaccggggagctctgttgagctgccg
tgcctggtacactccaacctagcccaggtgatgtggaaatccaacagctcggttctcacc
gaggcctctcgcttccacctcataggcgaaaatggtctccttatttacagcgtggctcca
gaggatcaaggtcactacgagtgctggtctgtggaatgggcccccgccgtcggaaagaac
ttcagccgcctcctggccggatacatcctcagtctggatctcccgcccagaccgccacag
caggcgggtcacgtgaccaccaccctcagcaaccaggagacatctagcacacataccgct
gaaggtaatgttgagacagacagagacccactaacttcagcccttgcccctcccagcttc
acagccacagtcctgttcacctccccaccccagactgactcatcactaaccccacccccc
agcagcacaatcaaattccagccaaaacatcttccaagctccaatgctccccgcccagac
agccgggacccagcagccgagtatttgcagcacaacaacagcattgccctcctcttcctc
ttcctcctgttcttcctcctcttcttggctgcactggcctacaactgctacatgcagtac
ctcccggctccctgcctgcgcatgcgagccgctctgctgggcagtcacaagagcacccat
cagcccgagtaccgggcctgtgaggcaggtctgatggaagcaccggcaagcgacaaaatc
aacatgacggagcagccaacgcagaacggcagccaaaccacccaaaacctgcgggcgctc
cgcgacaccgggtacgagaccgagccggagtgcggcaacggccggatcccttctcacagc
ttcggggacgacagcccgtcccaggagaaacccttcgatgtggactgtgaatctcagccc
atccagttcgcagacgcagattaa
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