Lates calcarifer (barramundi perch): 108874093
Help
Entry
108874093 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 20
KO
K11848
ubiquitin carboxyl-terminal hydrolase 20/33 [EC:
3.4.19.12
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108874093
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108874093
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108874093
Peptidases and inhibitors [BR:
lcf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108874093
Ubiquitin system [BR:
lcf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108874093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
zf-UBP
UCH_1
FlhC
Motif
Other DBs
NCBI-GeneID:
108874093
NCBI-ProteinID:
XP_050928917
UniProt:
A0AAJ8DRZ8
LinkDB
All DBs
Position
LG9:15590938..15606788
Genome browser
AA seq
942 aa
AA seq
DB search
MAEQDICPHLDSIGEITKEDLLQKSKGTCQSCGAGGPNLWACLQNDCPYVGCGESYSDHS
TLHAQAKKHNLTVNLTTFRIWCYVCEREVFLEHRPALVPVPAAPHHCKAAEQEAAPQPVG
HPLKAVPIAVAEEEGSESEEDELKPRGLTGMKNIGNSCYMNAALQALSNCPPLTQFFLDC
SGLVRTDKKPALCKSYQKLISELWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFL
RCLMDQLHEELKEPLTECSMSGEGSDGEERRDGDRSPSEDEFLSCDSAPASDRGEGGGAG
DGELLMQDECDGVRSSPVVGMVAVSPGGMISEKERLKERRVSGSSLRGGSQEMDEDADVD
TAAEEEVPERGEEEEVTPAPNTEIQNQENNQTSNTGQGQGQSNNTSEPDNEASMTQPQST
PCSPVRTLQELHPKLSSSPPRSSPLRSAGPAYSFKKAQLLLSARKKKQSHYRSVISDIFD
GSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSSIHQNLPVKTGVCPDTYGSQ
GWISYIMDSIRRFVVSCIPSWFWGPMVTLEDCLAAFFAADELKGDNMYSCERCKKLRNGV
KYCKVLRLPEILCIHLKRFRHEVMYSFKISNHVSFPLEGLDMRPFLAKESPSQVTTYDLL
SVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRKSSEESV
RERQKVVALANMKEPSLLQFYISREWLNKFNTFAEPGPISNHTFLCRHGGIPPNKYHYID
DLVVIVPQNVWEYLYNSFGGGPAVNHLYMCAICQVEIEALAKRRKMEIDTFIKLNKEFQA
EEAPTVILCISMQWFREWESFVKGKDNEPPGPIDNSKIGVMKGGHIQLKQGADYGQISEE
TWQYLLGIYGGGPEIAVRQTVAPADPDSLHGERKIEAETRAL
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaagacatttgtccccacctggactccataggagagataaccaaagaggac
ctcctccagaaatccaaggggacctgccagtcatgtggagcaggtggcccaaacctgtgg
gcctgtctgcagaatgactgcccatatgttggttgtggagagtcctactccgatcacagc
accctgcatgcacaggctaagaagcacaacctgaccgtgaacctgacgacattcaggatc
tggtgttacgtgtgtgagcgggaggtgtttctggagcacaggcctgccctggtgcccgta
cctgctgctcctcaccactgtaaagctgcagagcaggaagcagctcctcagccagtaggt
cacccgctgaaagcagtaccaattgctgtggcagaagaagaaggttcagagtcagaggag
gatgagcttaaacccagaggcttgacaggaatgaaaaatattggaaactcttgctacatg
aatgcagctcttcaggctctgtccaactgtcctcctctcactcagttcttcctggactgc
agtggattggtccggaccgacaagaagcctgctctctgtaagagctaccagaaactcatc
tcagagctctggcataaaaaacggcccagctatgttgtccctaccagtctgtctcatggc
atcaaactcgtaaaccccatgtttcgtggttacgctcagcaggacactcaggagttcctg
cgctgtctgatggaccagttacacgaggagctgaaggagcccctgacagagtgcagcatg
agcggggagggaagtgacggggaggagagaagagatggcgaccgctccccgtccgaggac
gaattcctgtcctgcgactctgctccagctagcgaccgcggggagggaggaggtgcaggc
gacggcgagctgctcatgcaggacgagtgcgacggggtcaggtcgtcaccggtggtgggc
atggtggccgtcagtcccggcgggatgatctcagagaaggagaggctgaaggaacggagg
gtgtctggctcgtccctccgtggaggctcgcaagagatggacgaggacgcagatgtagat
acagcggctgaggaggaggttcctgagaggggagaggaagaggaggtgacaccggctcca
aacactgagatccaaaaccaagagaataaccagacatctaataccggacaggggcaaggc
cagagcaacaacacctcagagccagacaatgaagcatcaatgacccagccccagtccact
ccctgcagtcctgtgcgaacccttcaggagctgcatcccaaactgtcctccagtccacct
cgctcgagcccacttcgctctgcaggacctgcgtactccttcaaaaaagctcagctgctg
ctcagtgccaggaagaagaaacagtcccactatcgcagtgtgatctctgacatctttgat
ggctctatcctcagtctggtccagtgtttaacctgtgacagggtctctactacagtggaa
accttccaagacttgtccctccctattcctggcaaagaggacttggccaagctccactcc
tccatccatcaaaatcttccagtcaagacaggcgtttgtcccgacacttatggctcacag
ggctggatctcctacatcatggactccatacgccggtttgtagtctcgtgtatccccagt
tggttttgggggcccatggtaacactagaggactgcctcgctgccttctttgctgcagat
gaactcaaaggggacaacatgtacagctgtgagagatgtaaaaagctgagaaatggtgtg
aagtattgcaaagtgcttcgacttccagagattctgtgcattcacctgaagcgtttccgg
cacgaggtcatgtattcgttcaagataagcaaccatgtatctttcccattggagggcctc
gacatgcgaccttttctggctaaagaaagtccatcccaagtcaccacctatgacctactt
tcagtcatttgtcaccatggcacggcaggaagtggacactacatagcttactgtcagaat
gtgatcaatggccagtggtatgaatttgatgatcagtatgtcacagaagtccacgagacg
gtggtgcagaatgcagaggcctacgtgttgttctataggaaaagtagcgaggagtcagtg
agagagaggcagaaggtggtggctctggccaacatgaaagagcccagcctgctgcagttt
tacatctccagagaatggctcaacaagttcaacacctttgccgaaccaggccccatcagc
aaccacacatttctttgtcggcatggaggcatccctcctaataaataccactacatagac
gacctggttgtgatagttccacagaatgtgtgggagtacctttacaacagttttggaggc
ggccctgcagtcaaccacctctacatgtgtgccatctgccaagtggagatcgaagctctg
gctaaacgcagaaaaatggaaatagacacattcattaagctgaacaaagagttccaggct
gaggaggctccaacagtgatcctatgtatcagcatgcagtggttcagagagtgggagagc
tttgtgaagggcaaagacaacgagccacctggtcccatcgacaacagtaaaattggcgtc
atgaaaggaggacacatacaactcaagcaaggtgcagactatggtcagatctcagaggag
acatggcagtacttgttgggtatttatggcggaggccctgagatcgcagtgagacagacg
gtggccccagctgaccccgacagccttcacggagagaggaaaatcgaggcagagaccaga
gcactttga
DBGET
integrated database retrieval system
