KEGG   Lates calcarifer (barramundi perch): 108874562
Entry
108874562         CDS       T04895                                 
Name
(RefSeq) protocadherin-10a isoform X2
  KO
K16499  protocadherin delta 2
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lcf04515]
    108874562
Cell adhesion molecules [BR:lcf04515]
 Cadherins
  Protocadherins
   108874562
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 DUF4621 DUF4832
Other DBs
NCBI-GeneID: 108874562
NCBI-ProteinID: XP_018518589
UniProt: A0A4W6EHA0
LinkDB
Position
LG5:24932824..24952882
AA seq 1038 aa
MILLIFLLSILDGAVSQLHYSVPEEQEPGSVVGNIAEDLGLDITKLSARRFQTVPSSRTP
YLEVNLENGALVVKEKIDREEICKQTIPCLLHLEVFLENPLELFRVEIEVMDINDNPPSF
PETDISVEISESAIPGTRFPVENAFDPDVGTNALSTYAITNNNYFYLDVQTQSDGNKFAE
LVLEKPLDREQQAVHRYVLTAVDGGIPQRTGTALLVVKVLDSNDNAPTFDQSVYTVNLRE
NSPVGTLVIQLNATDVDEGQNGEIVYSFSSHNTPRIKDLFNIDARTGRIEVAGEVDYEES
NTHQIYVQAKDLGANAVPAHCKVLVKLMDVNDNTPEIGFSTVTESVSEQDAPGTVIALFS
VSDRDSGENGQMSCEILGDVPFKLKSSFKNYYTIVTDGPLDRESTDSYTITVVAKDKGQP
SLATSKSIKVHVSDENDNAPRFTQAVYDVYVTENNVPGAFIHAVSALDPDIGQNALITYS
ILECDIQGMSVDTYVSINQDTGYLYALRSFDYEQLKEFSFMVQAKDSGAAELFSNATVNV
IIVDQNDNAPTVIAPIGKNGTAKEHLPRSAEPGYLVTRIVAMDADDGENARLSYSILRGN
EMEMFRMDWRTGELRTARRISPKRDPQGYYDLLIEVRDHGQPPLSSSASVSVILVDSVVE
GRSGDRGSASKAKETSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKTLNLYTCLLAG
DCCLCCGSCCSRQARGRKQKKLSKSDIMLVQSTNVTSGVGPVGQVPVEESGVGGVGGGFG
SHHHQNQNSYCYQVCLTPESAKTDLMFLKPCSPSRSTDTDHTNPCGAIVTGYSDQQPDII
SNGSILSNETKHQRAELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNR
GHSAGADLFSNCTEECKALGHSDRCWMPSFVPSDGRQGPDYRSNLHVPGMDATLPDTEVP
SSVNLSDQLTMTSSTTSSNDRSFSTFGKDGQRSQSHHSLHHHLHQQQQQYSSSTLERKEY
DRGTLPYKPTFLSRKRIC
NT seq 3117 nt   +upstreamnt  +downstreamnt
atgattttgttaatattcctgctctccatcctggatggagctgtctctcagctacattac
tccgtgccagaggagcaggagcctggctctgtggttgggaatatcgcagaggatttgggg
ctggacattaccaaactttccgctcgccgctttcagacggtgcctagttcacggacacct
tatctggaggtgaacttagaaaacggtgcgctcgtagtgaaggagaaaatcgaccgggaa
gaaatctgtaagcagaccatcccgtgcctactgcacctggaggtgtttctggagaacccg
ctggagctctttcgcgtggagatagaggtgatggatatcaacgacaatccacccagcttt
cccgagacggacatttccgtggagatatcggagagcgccatccccgggacccgtttcccg
gtggagaacgccttcgaccccgacgtgggcacaaacgcgctcagcacatatgccataacg
aataataactatttttaccttgacgtgcagacgcagagcgacgggaacaagtttgcggag
ctggtgctggagaagccgctggacagggagcagcaggcggtgcaccgctatgtgctgacg
gctgtggatgggggcatcccgcagcggaccgggacggctctcctggtcgtgaaagttctg
gactctaacgataacgcgcccacgtttgaccagtccgtgtacactgttaacctgcgggaa
aactcccccgtgggaactctggtcatccagctcaacgccacggatgtcgacgagggacaa
aacggggaaatagtttattctttcagcagccacaataccccgcggataaaggacttattc
aatattgatgccagaacaggtaggatcgaggtggcgggggaggtggactatgaagagagc
aacacgcaccagatttacgtccaggctaaagatctgggggctaatgcggtccctgcgcac
tgcaaagtgctggtcaaactcatggacgtgaacgacaacacaccagagatcggtttcagc
actgtgaccgagtccgtgagcgagcaggacgcccccggcaccgtgatcgcactttttagc
gtctcggaccgggactccggcgaaaacggacaaatgagctgcgagatattaggagacgtc
cccttcaagctcaagtcgtcttttaaaaactactacaccatcgtgacggacgggccgctg
gacagagagagcactgattcgtacaccatcaccgtggtggccaaagacaagggtcagccg
tcgctcgccaccagcaagtccattaaagtgcacgtctccgatgagaacgacaacgcgccc
cgttttacacaggctgtttatgatgtgtatgtaactgagaataacgtgcccggagctttc
attcacgccgtgagcgctttggaccctgatataggacaaaacgctcttatcacctactcc
atattggagtgcgacatacagggcatgtctgtggacacgtatgtgtccatcaaccaggac
accggctacctttacgcgctgcgctcttttgattatgagcagctgaaggagtttagcttc
atggtccaggctaaggactcaggtgcagctgaactcttctccaatgccactgtaaatgtg
atcatagttgaccaaaatgacaacgctcccactgtaatagcccccatcggtaagaacggc
acagccaaagagcacttgccgcgctctgcggagcccggctacctggtgacgcgcattgtg
gccatggatgcggacgatggcgagaacgcacggctgtcctacagcatcctgcgtggcaac
gagatggagatgttccgcatggactggaggacaggggaactgcggacagcccgcaggatc
tctcccaagcgggacccgcagggctactacgacctgctgatcgaagtgagggaccacggg
caaccccctctctcttcctccgccagcgtgagcgtaatactagtggacagtgtggtcgaa
ggccgcagtggggatcgcggctcggcctccaaggcgaaggagacctcccttgacctcact
ctcatcctcatcatcgccctgggctccgtctccttcatcttcctcctggccatgatcgtg
ctggccgtgcgctgccaaaaggacaaaaccctcaacctgtacacgtgtctgctggccggt
gactgctgcctgtgctgcggctcgtgctgcagcaggcaagctcgcggccggaaacagaag
aagctgagcaaatccgacatcatgttagttcagagcactaacgtgacttcgggggtgggc
cccgtggggcaggtgcccgtggaggagtctggtgtgggcggcgtgggaggggggtttggc
tcccaccatcaccagaaccagaactcctactgctaccaggtgtgtctgacgccggagtcc
gccaaaacggatctgatgttcctcaaaccgtgcagcccctctcgcagcactgacacggat
cacaccaacccttgcggcgccatagtcacgggttacagtgaccaacaaccggacatcata
tccaacggcagtattctctctaatgagacaaaacaccaacgagcagaactcagctatctg
gtggacagacccagacgtgtcaacagttcggcattccaagaagcagacattgtcagctcc
aaagacagtggtcatggcgacagcgaacagggcgacagcgaccatgatgccaccaaccgg
ggtcattcggctggtgctgacctgttctccaactgcacagaggagtgcaaggccctaggc
cactctgaccgctgctggatgccgtcatttgtgccgtccgacgggcgccaggggccggac
taccgcagcaacctgcacgtgcccggcatggacgccacactgcctgacactgaggtaccc
tcctccgtcaacctgtctgaccagctcaccatgacctcgtccaccacctcgtccaacgat
aggtcattctccacctttggcaaggacggtcaaaggtcacagtcacaccacagccttcac
catcacctccatcagcaacagcagcagtacagctccagcacgctagagaggaaagaatat
gatagggggaccctaccgtacaaacccacctttctctcccgcaaaaggatttgctag

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