Lates calcarifer (barramundi perch): 108875018
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Entry
108875018 CDS
T04895
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108875018
04082 Neuroactive ligand signaling
108875018
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108875018
Ion channels [BR:
lcf04040
]
Ligand-gated channels
GABA-A
108875018
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Ig_GpJ_C
Motif
Other DBs
NCBI-GeneID:
108875018
NCBI-ProteinID:
XP_050934112
UniProt:
A0A4W6F4L8
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Position
LG19:complement(13525646..13541364)
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AA seq
477 aa
AA seq
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MQVDAVLVLFCVWLVGAAGKMAQSRGHKLETYKQSRSRRETRMEGGGGHKSGSPIYKRSP
DMTKSPMTKSEQLLRIDDHDFTMRPAFGGPPIPVGVDVQVESLDTISEVDMDFTMTLYLR
HYWKDERLSFPSTNNQSMTFDSRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVYPDGN
VLYSLRVTVTAMCNMDLSRFPLDTQTCSLEIESYAYTDDDLMLYWKKGNESLNTDDRISL
SQFLIQKFHTTTKLAFYSSTGWYNRLYIHFTLRRHIFFFLLQTYFPATLMVMLSWVSFWI
DRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAV
NYLSTVQERKERKLRERLPCTCGIGNPDEMMIDPQITGYGSMDVNTTGNYGMPENGGRQE
RILAQVALNDPQIASQVKPSRGYVNIWIDTHAIDKYSRVVFPGAYILFNIIYWSIYS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtggacgctgttcttgtgctcttctgtgtctggctcgtgggagcagctgggaag
atggcccagtccaggggtcacaagctggagacctacaaacaaagcaggtcgcgaagagag
accagaatggagggtggtggaggtcacaaatctggaagcccaatttacaaacgaagccca
gacatgacaaaatcaccgatgacgaaatctgagcagctcctgagaatagacgaccacgat
ttcaccatgagaccagcgtttggaggtcctccaattcctgttggggtagatgttcaggtt
gaaagtctggataccatctctgaagtagatatggacttcaccatgacactgtacctgcgt
cactactggaaggacgagcggctgtcgttcccgagcaccaacaaccagagcatgaccttt
gacagtcgcctggtgaagaagatctgggttcctgacatgttctttgtccactccaagcgc
tctttcatccacgacaccaccaccgacaatgtcatgctgagggtttatcctgacggcaac
gtcctctacagtctcagagtcactgtcactgccatgtgcaacatggacctcagccgcttc
cccctggacacccaaacctgctcgttggagattgaaagctatgcgtacacagatgacgac
ctgatgttgtactggaagaaaggaaatgaatccctgaacaccgacgacagaatatctctg
tcccagttcctcatccagaaatttcacaccaccaccaaactggctttctacagcagcaca
ggctggtacaatcgtttgtatatccacttcaccctgcggcgtcacatcttcttctttctg
ctgcaaacctacttccctgctactctgatggtcatgctgtcctgggtgtccttctggatt
gaccgcagggccgtacccgccagggtgccactaggcatcaccacagtgctcaccatgtcc
accatcatcaccggggtcaacgcctccatgccgcgggtctcctacatcaaggcagtggac
atttacctctgggtcagttttgtgtttgtcttcctgtcggtgatagagtacgcagcggtc
aactacctctccaccgtacaggagaggaaagagaggaagctgagggagagactgccgtgt
acctgtggcatcggcaacccagacgagatgatgatcgacccccagatcactggctatggg
tctatggatgtcaacaccacagggaattatgggatgccggagaatggcggccgccaggag
cgaatcttggcccaggtggcactgaacgacccgcaaatcgcaagccaggtgaagccgtcc
agaggctatgtaaacatttggatagacacccacgccatagacaagtactcgagggttgtc
tttcctggtgcgtacatcctctttaacatcatctactggtccatctactcgtaa
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