Lates calcarifer (barramundi perch): 108878199
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Entry
108878199 CDS
T04895
Symbol
unga
Name
(RefSeq) uracil DNA glycosylase a isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108878199 (unga)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108878199 (unga)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
108878199 (unga)
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
108878199 (unga)
Prokaryotic type
108878199 (unga)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
108878199
NCBI-ProteinID:
XP_018524161
UniProt:
A0A4W6GB16
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Position
LG13:10580298..10583037
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AA seq
308 aa
AA seq
DB search
MSCHGMSMFVLHCGRFLKPVSPPAARFLPALYFAQYTKIVQKKLKPSAVESEPTSPPLSP
LSPEQLERIARNKRAALDKLTSAQTPPGFGESWRRGLSAEFGKPYFKQLMSFVAEERKRH
TVYPPAEHVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVKRPVPPPPSLENMYKE
LISDIEGFQHPKHGDLTGWAKQGVLLLNAVLTVRAHQANSHKDKGWETFTDAVVQWLSDN
LEGLVFMLWGSYAQKKGAAINRKRHHVLQAVHPSPLSAHRGFFGCRHFSKANELLKKSGK
SPIDWKAL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagctgccacggcatgagcatgtttgtactccactgtggacggtttcttaagccagtt
tcacctccagctgctcgtttcttacctgctctgtactttgctcaatacaccaaaattgtg
cagaagaagctgaagccctcggcggtggagtcggagccgaccagcccacctcttagccct
ctgtccccggagcagctggagaggatcgcccgcaacaagagggcagcgctggacaaactc
acttccgctcagacgcctccaggtttcggggagagctggagaagggggctgtcagcagag
tttggaaagccttattttaaacaactgatgagctttgttgctgaagagaggaaacgccac
actgtgtacccacctgctgaacatgtcttcacctggacgcagatgtgtgacatcaaagat
gtcaaagtggtgatccttggccaggatccatatcacggtcctaaccaagcccatggactg
tgctttagtgtcaaaagaccagtgcctcctccacccagtttggagaacatgtacaaagaa
ctgatttcagacatcgaaggcttccagcaccccaaacacggagatctgaccggatgggcc
aaacaaggtgtgttgttgctcaacgctgtgttgaccgtccgagcgcaccaggccaactcc
cacaaagacaaaggctgggagacgttcaccgacgctgtggtgcagtggctcagcgacaac
ctggagggcctcgtcttcatgctgtgggggtcgtatgctcagaagaaaggagctgctatt
aacaggaaacggcaccatgtgctgcaggctgtgcatccctctcccttgtctgctcatcgt
gggttctttggatgcaggcatttctcaaaggccaatgagctgctgaagaaatctggaaag
tctcccatagactggaaggcactttaa
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