Lates calcarifer (barramundi perch): 108878368
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Entry
108878368 CDS
T04895
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-7
KO
K04809
nicotinic acetylcholine receptor alpha-7
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04020
Calcium signaling pathway
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108878368
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108878368
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108878368
Ion channels [BR:
lcf04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
108878368
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
SUR7
Motif
Other DBs
NCBI-GeneID:
108878368
NCBI-ProteinID:
XP_018524512
UniProt:
A0A4W6DIL7
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Position
LG8:13119565..13154633
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AA seq
536 aa
AA seq
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MRCHKFLGPCSVGIYIWTAMLFKGSLQGEHQRRLYKELLANYNRLERPVVNDSAAILVEL
GLTLLQIIDVDEKNQVLMTNAWLQLYWTDIYLSWNPENYPGVQNLRFPSDQIWTPDILLY
NSADERFDATFHTNVLVNASGYCQYIPPGILKSTCYIDVRWFPFDVQKCDLKFGSWTHNG
WLLDLQMLDVDTSTYIPNGEWDLVGVPAKRNELYYECCKEPYPDVTFTVTMRRRTLYYGL
NLLIPCVLISGLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQ
YFASTMMIVGMSVVVTVIVLQFHHHDPQGGKMPKWVRVVLLNWCAWFLRMKQPGDDRKRP
GYKYRHSSQHHSSTSSIEMGTVPSLSVPLSQTSCPPCPTGTSNGSMSLYFSSYHPIESPH
CPPSSDSGVALGGRAHGSPSDEAEPPGGVGSSVGGLGMGVGIPPPEIQRILEEVSYIAQR
FRDQDEAEAICSEWKFAAAVVDRLCLVAFSLFSIICTFTILMSAPNFIEAVSKDFT
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgcggtgccacaagtttttgggaccatgttcggttggaatttatatttggacggccatg
cttttcaaaggatccctgcagggggaacaccagaggaggctgtacaaagagctgctggct
aactacaacagactggagagacctgtggtcaatgactcagcagccatcttggtggaactg
ggcctcacactgctgcagatcatagatgtggatgagaagaaccaagtgctgatgaccaat
gcttggctgcagctgtactggacagatatctacctgagctggaatccagaaaactacccc
ggcgtccagaacctgcgattcccctcagaccagatctggacccctgacatcctcctttac
aacagtgcggacgagcggttcgacgccacctttcacacaaacgtactggtgaatgcatca
ggttactgccagtatatcccccctggcatcttgaagagcacctgctacatcgacgtgcgt
tggttccccttcgacgttcagaagtgcgacttaaagtttggctcctggacgcacaacggc
tggctgctggacctccagatgctggatgtggacacatccacctacatacccaacggggag
tgggaccttgtgggtgtgccagctaagcgtaatgagctgtactacgagtgctgtaaggag
ccctaccctgatgtgacgtttacagtcaccatgcgccgcaggactctgtattatgggctc
aatctccttattccctgtgtactgatctctggcttagccctgctggtcttcctgctacct
gcagactcaggggaaaagatttctctgggcatcactgtgctgctttcgctaaccgtcttc
atgcttctggtggcggagatcatgcctgccacatccgactctgttcctctcattgcccag
tactttgccagcactatgatgatagtgggaatgtctgtggtggtgactgttatagtcctg
cagtttcaccatcatgaccctcagggaggcaagatgcccaagtgggtccgggtggttctg
ttgaactggtgtgcctggtttctccgtatgaaacaacctggagatgatcgcaagcggcct
ggttacaagtaccgtcactcctcccagcaccactccagcaccagctccatagagatgggc
acagtaccaagtctcagtgtgcccctctcacagacatcctgccctccatgccccacaggc
acctccaatggttccatgagcctctactttagcagttaccaccccatagagagcccacac
tgccctccttctagcgactctggggtggcgttaggcggacgtgcccacggctccccaagt
gatgaggccgagccacctggaggagtcggcagcagcgttggaggcctggggatgggagtt
ggaatccccccaccagagatccagcgcatcctggaggaggtgtcgtacatagcccagcgg
ttccgggaccaggatgaggctgaggccatatgcagcgagtggaagtttgcagcggcggtg
gtggaccggctgtgcctggtggccttctctctcttctccatcatttgcaccttcaccatt
ctcatgtcagcacccaacttcatagaggctgtttccaaggacttcacatag
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