Lates calcarifer (barramundi perch): 108878926
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Entry
108878926 CDS
T04895
Name
(RefSeq) FERM, ARHGEF and pleckstrin domain-containing protein 2 isoform X1
KO
K06082
FERM, RhoGEF and pleckstrin domain protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108878926
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
FERM_C
PH
FERM_M
FA
FERM_N
PH_13
IQ_SEC7_PH
PH_11
PH_20
Motif
Other DBs
NCBI-GeneID:
108878926
NCBI-ProteinID:
XP_018525483
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All DBs
Position
LG17:4028974..4056681
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AA seq
1061 aa
AA seq
DB search
MGEIEGSYRVLQTPGTRLGAQFNAGISTLEPGQSLSGNMVSGSKSHGRGLQIRVQGLDDS
QEFFDMDPKAFGQALLSEVFHRGNLIESDYFGLEFQNMQMNWVWLEPTKPIVKQVRRPAN
TLFRLSVKFFPPDPGQLQEEYTRYLFSLQMKRDLMEGRLICTENTGALLASHLVQSEIGD
YDDVADRDFLRMNKLLPYQEKVQERIMELHRRHLGQTPAESDFQILEIARKLEMYGVRFH
PAADREGTKINLAVAHMGLQVFQGNTKINTFNWSKIRKLSFKRKRFLIKLHPEVHGPHQD
TLEFMMASRDQCKIFWKICVEYHSFFRLFDQPQPKSKAILFTRGSSFRYSGRTQKQLVEY
VRENGAKRTPYQRRNSKIRMSARSLATDVPKQCLSFNDSLRAPGSPSSAAVSFHPAHISS
VLPRTELHHQPQPLSTLSHSPAPPQQHQHQQQPQSPLQATRPPSPPKEEPVKAASTSHYA
FQDSVVDSPQLSPFNSKGPLCLSPSFQMSTLSLPGQAPSPLQSPILSEVGSNARLEEEEE
GRRKRYPTDKAYFIAKEILTTERTYLKDLEVITVWFRSAVIKENAMPEGLMTLLFSNIDP
IYEFHRGFLKELDQRLALWEGRSNAHVKGDYQRIGDVMLRNMGALKEFTSYLQKHDEVLT
ELEKASKRLKKLETVYKEFELQKVCYLPLNTFLLKPIQRLMHYKLILERLCKHYSPAHRD
HDDCKEALKEVAEIATQLQSSLIRLENFQKLTELQRDLIGIENLTAPGREFIREGCLYKL
TKKGLQQRMFFLFSDMLLYTSKGVTATNQFKVHGQLPLHGMIVEESENEWSVPHCFTIYS
AQRTIVVAASSKVEMGKWIEDLNLAIDMAKKSQEKSSIFLDAGLTDRSNRSSDEVSLEQE
SEDDMNSSRTSLDKQTHHRANTTMHVCWHRNTSVSMSDHSLAVENQLSGYLLRKFKNSNG
WQKLWVVFTNFCLFFYKTHQDDFPLASLPLLGYTVSTPEESDSIHKEYVFKLQFKSHVYF
FRAESEYTFERWMEVIKSAASTTGRMSMLIPKGGPVEINGK
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgggggagatagagggttcataccgggttctgcagacccctggcacaaggctgggagcc
cagttcaatgctggtatcagcactttggagccgggccagagcctcagtggcaacatggtc
agcgggagcaaaagccatgggcgaggactacaaatccgtgtgcaggggttggacgactca
caggagttctttgatatggacccaaaagcttttggacaggccctcctctctgaggttttc
cacagaggcaacctcatagagagtgattactttggcctcgagtttcagaacatgcagatg
aactgggtttggctggaacccacaaaacccattgttaaacaagtcagaagaccagcaaat
accctatttaggctgtcagtgaaattcttccctccagaccccggtcagctgcaggaggag
tacacgaggtacttattttccctgcagatgaagagagatctgatggagggcaggttgatc
tgcacagaaaatacgggagccctgctggcctctcaccttgtccagtcggaaattggtgac
tatgacgacgtagcagacagggacttcctgaggatgaacaagctgttgccttaccaagag
aaggtgcaagagaggatcatggagctccaccgcaggcacctgggccagactccagctgaa
tcagatttccaaatcctggagattgcccgtaaactggagatgtatggagtccgcttccac
ccagcagctgaccgggaaggcaccaaaatcaatctggctgttgctcatatgggccttcaa
gttttccagggcaacacaaaaataaataccttcaactggtccaagattcgcaaactgagc
ttcaaaagaaaacggttcctgatcaagctccacccagaggttcatgggccccatcaggac
actctggagtttatgatggccagtcgagaccaatgtaaaatcttttggaagatctgtgtg
gaatatcactcatttttccgtttgtttgaccaaccccaacccaaatccaaagctatcctc
ttcactagaggctcttccttcagatacagtggaaggacccagaagcaacttgtggaatat
gtcagggaaaacggagcaaagagaacgccataccagaggaggaacagcaaaatacgaatg
tctgctcgctccctagcaacagatgtgccaaaacagtgcttgtcattcaatgacagtctc
agggccccaggctccccttcctctgctgcagtgtccttccacccagcacacatctctagt
gtcctcccgcgaacagaactccatcatcagccccagcctttgtccacactgagccattct
ccagcgcctccccagcagcatcagcaccagcagcagcctcagtcccctctgcaagctacc
agaccccccagccctccgaaggaagaacctgtcaaggctgcttccacatcccactacgct
tttcaagattcagttgtggacagccctcagctctcacccttcaactccaagggtcccctc
tgcctgtcgccctccttccagatgtcgaccctcagcctgccgggccaggccccgtcaccc
ctgcaaagccccatcctgagcgaggtgggcagcaatgccaggctagaggaggaggaggag
ggcaggaggaagcgatatcctaccgacaaggcctacttcattgccaaagagattctgacc
acagagcgaacatacctaaaagaccttgaggtcataactgtgtggttccgcagtgctgtg
atcaaagaaaacgccatgcctgaaggcctgatgaccctcctcttctccaacatcgacccc
atctacgagttccaccgaggcttcctcaaggagttggaccagaggctggctctctgggag
ggacgctctaatgctcacgtcaaaggtgactaccagaggattggtgatgtgatgctgagg
aacatgggtgctcttaaggaattcaccagctatctacagaagcatgatgaggttttgaca
gagttggagaaagccagcaagagactgaagaagctggagacagtctacaaagagtttgag
ctgcagaaggtctgctacctgcccctcaatacattcctgctcaagcccatccagcgcctc
atgcattacaaactcatcctggagagactatgcaagcattattcccctgcacaccgtgat
catgacgactgcaaggaggctctgaaggaagtggcagagatagccactcagctgcagagt
agtctgatccggctggagaatttccagaagctaacagagctgcagagagacttgattggt
atagagaacttgacagcaccaggcagggagttcatacgagagggatgtctgtacaagctc
accaagaaagggctgcagcaaaggatgtttttcctgttctcagacatgctcctctacaca
agtaaaggtgttacagcaaccaatcagttcaaagtgcatggccagctgccccttcatggc
atgatagttgaggaaagtgaaaatgagtggtcagtcccccactgcttcaccatctactct
gctcagagaactattgtagtggctgccagctccaaagtggagatggggaagtggattgag
gatctgaacctggctattgatatggccaagaagtctcaagaaaaatctagcatcttcctt
gatgctggactcactgatcgctccaaccgatcgtctgacgaggtttctctggagcaggag
tcggaggatgacatgaactcctcccggacttcactggacaagcagacgcaccaccgtgcc
aacacaaccatgcatgtgtgctggcaccgcaacaccagtgtgtctatgtccgatcacagc
ctggctgtggagaaccagctctcagggtacctgctgaggaagttcaagaacagtaatggg
tggcagaaactctgggttgttttcaccaatttctgcctgttcttctacaagactcaccag
gacgacttcccgctggctagtctccccctgcttggctacacagtcagcacccctgaggag
tctgacagcatccacaaggagtacgtcttcaaactgcagttcaagtcccatgtttacttt
ttccgggcagagagcgagtacaccttcgaaagatggatggaggtgatcaagagtgcagcc
agcactacgggccggatgagcatgctcatacctaaaggaggtcctgtggagatcaacgga
aaatga
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