Lates calcarifer (barramundi perch): 108881258
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Entry
108881258 CDS
T04895
Name
(RefSeq) xyloside xylosyltransferase 1
KO
K23800
xylosyl alpha-1,3-xylosyltransferase [EC:
2.4.2.62
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00514
Other types of O-glycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
108881258
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108881258
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.62 xylosyl alpha-1,3-xylosyltransferase
108881258
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
O-Glycan
108881258
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Motif
Other DBs
NCBI-GeneID:
108881258
NCBI-ProteinID:
XP_018528646
UniProt:
A0A4W6DTC9
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Position
LG17:15237474..15269731
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AA seq
397 aa
AA seq
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MGILRLVARTMGRISTFRSYQFVLLLAAALAVVAFYYFGSEKQNFSSTTKRIKQTQASHN
TNRNDADLTVDTRLSHTAGSEEQGGESEGFRSKRGDGEAANQRYHALMMFTKVDKSRSLQ
DKFRVAMLSMVKHGQFLEGEVLVFHFVSDQASQELGERMLQEFLLDATFKYEVLFHDVVA
LTQKLFPIVEAMQKHFSAGSGAYYSDAIFFLSVAMHQIMPESLTRIVQLDLDLKYRTNIR
DLFQEFDRFPPGAVIGIAREMQPVYRHTFWQYRKENPRTRVGEPPPDGLPGFNSGVMLLD
LGAMRASALYNQLLKPSNVAKLADQYRFRGHLGDQDFFTMIGMEHPELFYSLACGWNRQL
CTWWRDHGYGDVFQLYYRCDGPVYIYHGNCNSPIPDD
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcttaagactagtagccagaaccatgggtaggatcagtacttttaggtcctat
cagtttgtgcttctcctggctgctgcactcgctgttgtagctttttactactttggctca
gagaagcagaacttctccagcaccaccaagagaatcaagcagacccaggccagccacaac
accaacagaaatgatgcagacctgactgtggacaccaggctctcgcacacagctggatct
gaggagcaaggaggagagagcgagggtttcagatcaaagagaggggatggtgaggctgct
aaccaacgttaccacgcactcatgatgttcaccaaggtggacaagagccggagcctgcag
gacaagttcagggtggccatgttgtccatggtgaagcatggacaatttctggaaggagag
gtgttggtgtttcattttgtgagtgatcaggccagccaagaactgggagagaggatgctg
caggaatttctccttgacgcaacgtttaagtatgaggtgctgtttcatgacgtggtggct
ctgacacagaagctcttccctattgtggaggctatgcagaaacacttcagtgctggctct
ggagcttactacagcgacgccatcttcttcctgtctgtggccatgcatcaaatcatgcct
gaaagtctgacacgcatcgtgcagcttgacctggatctgaaatacaggaccaatatcagg
gacctcttccaagaatttgaccggtttcctccaggagcggtaataggcatcgccagagag
atgcagccagtctacagacacaccttttggcagtatcgtaaggagaaccctcggaccaga
gtaggtgaacctcctcctgacggcctcccaggcttcaacagtggtgtgatgttattggac
ctgggagcgatgagggcctcagcactctacaaccaactgttgaagcccagcaacgtggcc
aaactggccgaccaatatcgcttcaggggtcacctcggtgaccaggacttcttcaccatg
atcggtatggagcatcctgaactgttttattccctggcctgtggctggaacaggcagctg
tgcacctggtggagggaccacgggtacggagatgtgtttcagctgtattatcgctgtgat
ggacctgtctatatctaccatgggaactgtaactcccctataccagatgactga
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