Lates calcarifer (barramundi perch): 108882689
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Entry
108882689 CDS
T04895
Symbol
zgc:103759
Name
(RefSeq) U8 snoRNA-decapping enzyme
KO
K16855
U8 snoRNA-decapping enzyme [EC:
3.6.1.62
3.6.1.64
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00230
Purine metabolism
lcf01100
Metabolic pathways
lcf01232
Nucleotide metabolism
lcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
108882689 (zgc:103759)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108882689 (zgc:103759)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108882689 (zgc:103759)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
108882689 (zgc:103759)
3.6.1.64 inosine diphosphate phosphatase
108882689 (zgc:103759)
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
108882689 (zgc:103759)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nudt16-like
NUDIX
ComK
Motif
Other DBs
NCBI-GeneID:
108882689
NCBI-ProteinID:
XP_018530874
UniProt:
A0A4W6DC31
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Position
LG6:4056868..4061384
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AA seq
220 aa
AA seq
DB search
MASGQLSREEALACSECRHACHVMLYSDTKTQLFGRIPIRHIILMQMRFDGLLGFPGGLV
NPAEETLEAGLSRELLEEVGVALPVSVEDHVATCFAPASSPSSSSSRLILHFYVKKIEEE
QIREVERAAASTATDHGLEVLGMVRVPLYTMKGGGGLGLFMSHTFIGNARSQLVDALLRF
NLIAPKDLHKALTHSLKKHAHTAEDLKAALALTEAKRKWC
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtggacagctgtcgagggaggaggcgttggcgtgctcggagtgccggcatgca
tgccatgtgatgctttactctgacacgaaaactcagctgtttgggagaattcccatcaga
catatcatactgatgcagatgcgctttgacggtctgctgggtttccctggcgggctcgtt
aacccagcagaggagaccctggaggcgggcctcagcagggaattgttggaggaggtgggc
gtggctcttcctgtatcagtagaagatcatgtggccacttgctttgcccctgcttcatcc
ccctcctcctcatcctctcgtcttatccttcacttctacgtgaagaagattgaggaggag
cagattagggaggtggagagagcagctgcatccactgcaacagatcatggacttgaggtt
ctggggatggtcagagttccgctctacaccatgaaaggcgggggaggccttgggcttttc
atgtcgcacacgttcatcggcaacgctcgttcccagctggtcgacgctctgctgcgcttc
aacctgatcgcccccaaggatttgcacaaggccctcacacactctctgaagaaacatgca
cacaccgcagaagacctgaaagcggcccttgcccttacagaggcgaagaggaaatggtgt
tga
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