Lates calcarifer (barramundi perch): 108889149
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Entry
108889149 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: mitochondrial proton/calcium exchanger protein
KO
K17800
LETM1 and EF-hand domain-containing protein 1, mitochondrial
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108889149
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108889149
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial protein import machinery
Inner mambrane
Other inner membrane factors
108889149
Transporters [BR:
lcf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
108889149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LETM1_RBD
EF-hand_7
YjcQ
EF-hand_1
EF-hand_6
EH
Motif
Other DBs
NCBI-GeneID:
108889149
NCBI-ProteinID:
XP_018541024
UniProt:
A0AAJ7PXB7
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All DBs
Position
LG19:complement(21941542..21964501)
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AA seq
763 aa
AA seq
DB search
MALILFTRSRAPLMKTSRSLKNEFRKGKLQDGACLNCTALRLSSQKLDGLRLGSLAQVSS
FGPSLPLSDGYVGPSQSLDSQRLYCAFVLGASPLSYPAITPGAQWTIARPQDISGVRWIH
TSRRRWDDSKVEKSLRSIKDKMKLEEGGPVYSPTLDAEPVRRTLRQRVIDEIKHYYHGFR
LLWIDTTIAGRMLWRVLNGNALSRRERRQFLRTCADVFRLLPFLVFIIVPFMEFLLPVAL
KLFPNMLPSTFETQSKKEERLKKELRVKLEMAKFLQDTIEEIALRNKAAQGNVTEEFSTF
FQKIRDSGERPSNEQIIKFSKLFEDELTLDNLTRPQLVALCRLLELQSIGTNNFLRFQLI
MKLRAIRADDKLIAEEGVASLNVNEVQAACRVRGMRSLGVTEERLREQLSQWLELHLNQQ
IPTSLLLLSRAMYLPDTLSPADQLKTTLQTLPEMVTKEAQLMAAELELSKVDNKTKVETT
LQEEAAIRQDNKDREMERLADAAEKVARDSEFEREAEPAMSKADMAETLRDTAPVIEGIK
GEEITKEEIDMLSDACSKLKEQKKLLTLEKEELEELKDDVQEYNEDLEEIKKELCKSGQE
KTVEESKASQRLSKRVNRMIGRIDKIILELEKDKVILDGQMDSGTTPPVGLFFTKYNDAT
SLFYTFRENLISIDELIGVMRQIQNIPEHKLQSIAEALDDNKDGKIDIDDVIKVVELIDK
EDIDISTSQVTDIMVMLQKEEKLVGKEKAKDKAEKEQAATLNS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaatcctgtttacgaggtcccgggcaccgttgatgaaaacgtcccgatcatta
aagaatgaattccggaaagggaaactacaagatggtgcctgtttgaactgcacagctctc
agactctccagtcagaaacttgatggactccgacttggcagtttggcccaggtctcctca
ttcggtccttccctccccttgtcggacggatatgtgggcccctcccagagcctggactca
cagcggctctactgcgcttttgtcctcggagcctcccctttgtcctaccctgcgatcaca
ccaggggcccagtggacgatagcacgaccgcaggacatctccggtgtcaggtggatacac
acctcgaggaggagatgggacgactcgaaggtggagaagtcactgcgttcgataaaggac
aagatgaagctggaggaaggagggccggtgtacagtccgacactcgatgcagaacctgtg
agaaggacgctccgacagcgggtgatagatgaaatcaagcactactaccacggcttcagg
ctgctgtggatcgataccaccatagctggccgaatgctttggagggtgctgaacggaaac
gccctgtcccgacgcgagaggagacagtttctcagaacgtgtgcagacgtcttccggctt
cttcccttcctggtcttcatcatcgtccccttcatggagttcctgcttcctgtagctctg
aaactcttccccaacatgctgccgtccaccttcgagacacagtcaaagaaggaggagagg
ttgaaaaaggagctgagggtcaaactggagatggccaagttcttgcaggacaccatcgag
gagatcgctctgaggaacaaggctgcacaaggcaacgtgacggaggagttttccaccttc
ttccagaagatccgggactctggggaacgtcccagcaacgagcagatcataaaattctcc
aagctgtttgaggacgagctgactctggacaacctgactcggcctcagctggtggctctc
tgccgtctcctggaactccagtccatcgggactaacaacttcctccgcttccagctcatc
atgaagctgagggccatccgcgcagatgacaagctgattgcagaggaaggagtggcgagt
ctgaacgtgaacgaggtacaggcagcctgtcgcgtcagagggatgagatctctcggagtc
actgaggaacgactgagagagcaactcagccagtggttggagctgcatctgaaccagcag
atccccacctctctgctgctgctgtcccgggccatgtacctccccgatacgctgtctcct
gccgaccagctgaagaccacactgcagacgctccctgagatggtgacaaaggaggcccag
ttgatggcggcagagttggagctctctaaagtggacaataagaccaaagtggagacgacg
ctgcaggaggaggcggccatacgccaggacaacaaggacagagagatggagaggctggct
gacgctgcagagaaggtggccagggacagcgagtttgaacgtgaagcagagccggcgatg
tccaaggccgacatggctgagacactgagggacacagcaccggtcatagagggaatcaag
ggtgaggagatcaccaaagaagagattgacatgttgagtgatgcctgttcaaagctgaag
gagcagaagaagcttttgactctggagaaagaagagctggaggaactgaaggatgatgtc
caggaatacaacgaggacctggaggagataaagaaggagctctgtaagagcggccaggag
aagaccgtggaggagtccaaggcgagccagcgcctgtctaagagagtgaaccgcatgatc
ggtcgcatcgacaagatcatcctggagctggagaaggacaaggtcatcctggacggacag
atggacagtgggaccaccccacctgttggattattctttactaaatataatgatgccaca
agtctgttctacaccttcagggagaacctcatcagtattgacgagctgatcggcgtcatg
cggcagatccagaacattccagagcacaagctgcagagcatcgccgaggctctcgacgac
aacaaggacgggaagatcgacatcgacgacgtcatcaaagtggtggaactgatcgacaag
gaggacatcgacatctccacctcccaagtgacggacatcatggtgatgctgcagaaggag
gagaagctggtggggaaggaaaaggccaaggacaaggctgagaaggagcaggcagccaca
ctcaacagctaa
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