Lates calcarifer (barramundi perch): 108890088
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Entry
108890088 CDS
T04895
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108890088 (slc6a11b)
Transporters [BR:
lcf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
108890088 (slc6a11b)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
108890088
NCBI-ProteinID:
XP_018542395
UniProt:
A0A4W6EUY9
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Position
LG12:complement(25537978..25559682)
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AA seq
611 aa
AA seq
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MTAEKSGPVINGKPEDGRDPEGSSSSLDNGDYNERGHWNNKIEFVLSVAGEIIGLGNVWR
FPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGIGYA
TQVIEAHLNVYYIVILAWAIFYLFNCFTTELPWAGCGHYWNTENCVDYYGENATNITNPN
ATSPVIEFWERRVLKISDGIEHMGGMRWELAMCLALAWFICYFCIWKGPKSTGKVVYVTA
TFPYVMLLILLIRGVTLPGAYDGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICLGCLT
ALGSYNAYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQNVPIEAVAESGPGLA
FIAYPKAVTMMPLSPLWACLFFMMLIFLGLDSQFVCVESLVTAVVDMYPETFRRGYRREL
LILGMSIVSFFIGLIMCTEGGMYVFQLFDSYAASGMCLLFVAIFESICIGWVYGSDRFYL
NIEDMIGYKPVFFIKWCWMILTPGICAGIFLFFLIKYKPLKYNNVYTYPDWGYGIGWFMA
MSSMVCIPLGIIWMIWKTPGTFSERMKKLTTPSPDLKMRGKLAALSPYAANDAKLKADGK
ISTISEKETHF
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgagaagagtgggcccgttataaacggtaaaccagaggatggcagagacccg
gaagggtccagctccagcctagacaacggggactacaatgagagaggccactggaacaac
aagatcgagtttgtcctgtctgtggccggagagatcatcgggctgggaaacgtctggaga
ttcccttacctctgctacaagaatggaggaggtgcgttcttcgtaccgtatgtcatcttc
ttcgtgtgctgcggtatccccgtgtttttcctggagactgccctgggccagttcaccagt
gagggaggcatcacctgctggaggaaagtctgcccgctgtttgagggtattggctatgca
acacaggtgattgaagctcatctaaacgtgtactatatagtgatcctagcctgggcaatc
ttctacctcttcaactgcttcaccactgagctgccttgggctggctgtgggcactactgg
aatacagagaattgtgttgactactatggagaaaatgccaccaacatcacaaaccctaat
gcaacctctccagtcattgagttctgggaacgcagagtactgaagatatcagatggtata
gagcacatggggggaatgcgctgggagctggccatgtgtctggccctggcctggttcatc
tgctacttctgcatctggaagggacccaagtcaactggcaaggttgtgtacgtgacagct
acctttccttacgtcatgttgttgatcctgctaatcagaggagtgacgctgccaggagca
tatgacggcatcaagttctacctctacccagacatttcacgtctctcagaccctcaggta
tgggtggatgcaggaacccaaatcttcttctcctatgccatctgcttgggctgtctcact
gctctgggaagttacaacgcctacaacaataactgctacagggactgcatcatgctgtgt
tgtctgaacagcggcaccagctttgtcgcaggtttcgctatcttctccgtgctgggcttc
atggcctacgaacaaaatgttcccatcgaagctgtggcagaatctggtcctggtcttgca
tttattgcataccctaaggctgttactatgatgcctctgtctccactttgggcttgtctc
ttctttatgatgctcatcttccttggcctggacagtcagtttgtgtgtgtggagagtttg
gtgacagctgtggtggacatgtacccagagaccttcaggagaggctaccgcagagagctg
ctgattctgggcatgtctatagtctccttcttcattggtctcatcatgtgcacagaggga
gggatgtacgtcttccagctgtttgactcgtacgctgccagcgggatgtgtttgctgttt
gtggccatatttgagtccatatgtatcggctgggtgtacggtagtgacagattctaccta
aatattgaggacatgattggctacaaacctgtcttcttcatcaaatggtgctggatgatc
ttgaccccgggcatctgtgctggaattttcctgttcttcctgattaaatacaaaccgctg
aagtacaacaacgtgtacacctaccctgactggggctacgggatcggctggttcatggcc
atgtcctcgatggtctgcatcccactggggattatctggatgatctggaagactcctggc
accttctctgagagaatgaagaagttgacgactcccagcccagacctcaaaatgagaggg
aaactcgccgccctcagtccttacgccgccaacgacgcaaaacttaaggctgatgggaaa
atatccaccatctcagagaaggagacgcatttctaa
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