Lates calcarifer (barramundi perch): 108890397
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Entry
108890397 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor subunit pi
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108890397
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108890397
Ion channels [BR:
lcf04040
]
Ligand-gated channels
GABA-A
108890397
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
108890397
NCBI-ProteinID:
XP_050932767
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Position
LG16_LG22:881880..942502
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AA seq
459 aa
AA seq
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MALSVSGGTVFTVLLICRLLESSLLNAEVKEGEILPPTIQRLMKGYNKYLRPFFDNGPVT
VGMSLDIASIDTISEINMDYTATIFLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDTFI
VDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESWG
YNINDVMFYWTRGNESVSGLDTLQLAQYTVEDHYTSVSEAIYETGRYPKLVFHFELKRSI
LYFILETYVPSSLLVVLSWVSFWISLSSVPARICIGVTTVLTMTTLMMGARTSLPNANCF
IKAIDVYLGICFSFIFGALIEYAVAHFCTLTHSDAHMLMYGHHMHDFDDEMNGIVTTIST
HSRAKRRKEPAATPPSVPASTELTVSPSSPSGSEPKPEASPPEATNWCLTALATVRKVLR
SINCCHVENPHHIDNYSRVTFPLSFVIVNLLYWTYYLYF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtctgtatctggagggaccgtgttcacagttctcctcatttgcaggttgtta
gagagttcgttgctcaatgcagaagtgaaggaaggagagattctgcctcctaccattcag
aggctgatgaaaggatacaacaagtacctcaggcctttctttgacaatggtccagtaaca
gtgggcatgagcctggacatcgccagcattgacaccatctcagagatcaacatggactac
accgccaccattttcctccgccagcgctggacagacgagcgcttggtgtttgaaggcaac
aagagcctgagtcttgacgggcgacttgtggagctcctctgggttcccgacaccttcatc
gtggactccaagaagtccttccttcacgacatcactgtggagaacagactgatccgcatc
ttccccaacgggaccgttctctacgcgctgaggattaccaccactgtggcctgcaacatg
gatctgaccaagtaccccatggacaagcagacgtgcacgctacaactggagagctggggt
tacaacattaacgacgtcatgttctactggaccagaggaaatgagtctgtcagtggttta
gacaccctgcagctggctcagtacacagtggaggaccactacacatctgtctcagaggcc
atctatgaaactggccgttaccctaagctggtcttccactttgagctgaagaggagcatc
ctctacttcatcctggagacatatgtcccctcgagtctgctggtggtcctctcatgggtt
tccttctggatttccctgtcctcggttccagcacggatttgtataggagtgaccacggtg
ctgaccatgaccacgctgatgatgggagcccggacgtcactgcccaacgccaactgcttc
atcaaggccatcgacgtttacctgggaatctgcttcagcttcatcttcggggcgctcatc
gagtacgctgtggcccacttctgcaccctcacacacagcgacgcacacatgctcatgtac
ggccaccacatgcatgacttcgatgatgaaatgaacggcatcgtcaccaccatctccact
cactccagagccaagagacgcaaggagcctgctgcaactcctccctcggttcctgcctcc
acagaactcactgtcagcccctccagcccctcgggcagtgagcccaagcccgaggcgtcg
cctccagaggccaccaactggtgcctcactgctctggccaccgtccgcaaagtgctccgc
tccataaactgctgtcacgtggagaacccccaccacatagacaactactccagagtcacc
ttccccctgtcttttgtcattgttaacctgctctactggacatattatctgtacttctag
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