Lates calcarifer (barramundi perch): 108892039
Help
Entry
108892039 CDS
T04895
Name
(RefSeq) vacuolar-sorting protein SNF8
KO
K12188
ESCRT-II complex subunit VPS22
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108892039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108892039
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108892039
Membrane trafficking [BR:
lcf04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
108892039
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108892039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
MarR_2
AbiEi_4
CDK5RAP3
Sigma70_r1_1
MarR
DUF4896
Motif
Other DBs
NCBI-GeneID:
108892039
NCBI-ProteinID:
XP_018544987
UniProt:
A0A4W6E1Y2
LinkDB
All DBs
Position
LG23:complement(15766037..15769643)
Genome browser
AA seq
258 aa
AA seq
DB search
MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQIVQMSKQLETFKSNLEEFASKHKQEIRK
NSQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LDELHQRVLKGRGKYAQDVSQDDLMRAIKKLKVMGNGFGMIPVGGSYLVQSVPAELNMDH
TVVLQLAEKKGYVTVSEIKDSLKWEKERACHVLDHLLKEGLAWLDSQAAGEAQYWLPALF
SELTSRDVTPEEANQMTP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggagaggtgtcggagcgggagctattgccaaaaagaaactggcagaggccaaa
tataaggaaagaggaactgttcttgcagaggaccagattgtccagatgtccaagcagttg
gagaccttcaaatccaacctagaggagtttgccagcaaacacaaacaagaaatccgaaag
aactcacagtttagggtgcagtttcaggaaatgtgtgccaccattggagttgacccactt
gcctctggcaaaggtttttggtctgagatgcttggagttggtgacttctattatgagctc
ggtgttcagatcattgaagtgtgcctggccctgaaacacagaaatggagggcttattact
ttggatgaactccatcagagggtgctgaaaggaagaggcaaatacgctcaggatgtaagc
caagatgacttgatgagagccataaagaaactgaaggtgatggggaacggttttgggatg
attcctgtcggtggttcttacttggtgcagtcagtcccagcagagctcaacatggaccat
actgtagttctacagctggccgagaaaaagggatacgtcacagtgagtgagattaaggac
agcttgaaatgggagaaggaacgagcttgtcacgtcttggatcacctgctgaaagaaggc
ttggcctggttggactctcaagcagctggagaagcacagtactggctgcctgctctcttc
tctgagctcacatcccgtgatgtcacaccggaggaggccaatcagatgacaccttag
DBGET
integrated database retrieval system