KEGG   Lates calcarifer (barramundi perch): 108892039
Entry
108892039         CDS       T04895                                 
Name
(RefSeq) vacuolar-sorting protein SNF8
  KO
K12188  ESCRT-II complex subunit VPS22
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108892039
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108892039
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcf04147]
    108892039
Membrane trafficking [BR:lcf04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    108892039
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108892039
SSDB
Motif
Pfam: EAP30 MarR_2 AbiEi_4 CDK5RAP3 Sigma70_r1_1 MarR DUF4896
Other DBs
NCBI-GeneID: 108892039
NCBI-ProteinID: XP_018544987
UniProt: A0A4W6E1Y2
LinkDB
Position
LG23:complement(15766037..15769643)
AA seq 258 aa
MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQIVQMSKQLETFKSNLEEFASKHKQEIRK
NSQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LDELHQRVLKGRGKYAQDVSQDDLMRAIKKLKVMGNGFGMIPVGGSYLVQSVPAELNMDH
TVVLQLAEKKGYVTVSEIKDSLKWEKERACHVLDHLLKEGLAWLDSQAAGEAQYWLPALF
SELTSRDVTPEEANQMTP
NT seq 777 nt   +upstreamnt  +downstreamnt
atgcatcggagaggtgtcggagcgggagctattgccaaaaagaaactggcagaggccaaa
tataaggaaagaggaactgttcttgcagaggaccagattgtccagatgtccaagcagttg
gagaccttcaaatccaacctagaggagtttgccagcaaacacaaacaagaaatccgaaag
aactcacagtttagggtgcagtttcaggaaatgtgtgccaccattggagttgacccactt
gcctctggcaaaggtttttggtctgagatgcttggagttggtgacttctattatgagctc
ggtgttcagatcattgaagtgtgcctggccctgaaacacagaaatggagggcttattact
ttggatgaactccatcagagggtgctgaaaggaagaggcaaatacgctcaggatgtaagc
caagatgacttgatgagagccataaagaaactgaaggtgatggggaacggttttgggatg
attcctgtcggtggttcttacttggtgcagtcagtcccagcagagctcaacatggaccat
actgtagttctacagctggccgagaaaaagggatacgtcacagtgagtgagattaaggac
agcttgaaatgggagaaggaacgagcttgtcacgtcttggatcacctgctgaaagaaggc
ttggcctggttggactctcaagcagctggagaagcacagtactggctgcctgctctcttc
tctgagctcacatcccgtgatgtcacaccggaggaggccaatcagatgacaccttag

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