Lates calcarifer (barramundi perch): 108893076
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Entry
108893076 CDS
T04895
Name
(RefSeq) zinc finger protein 827
KO
K27104
zinc finger protein 827
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108893076
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108893076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_5
zf-C2H2_16
zf-H2C2_2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_5
zf-C2H2_15
HVO_2753_ZBP
Motif
Other DBs
NCBI-GeneID:
108893076
NCBI-ProteinID:
XP_018546398
UniProt:
A0A4W6ETM2
LinkDB
All DBs
Position
LG5:complement(6767835..6832615)
Genome browser
AA seq
1521 aa
AA seq
DB search
MPRRKQEQPKRLPSHVDSNEEGGPDSGPVEEEAWFGNASDTRSESSSYGDTQDELLLPRG
SSPDERPGVSTGSADHDTCGGESSMGCPTPIHRASLELLGLDGGAFSAQDTLSSVVSSLY
GEAASRALGKPLSSNLRRLLEAGSLKLDTGDLLGRSSRGGAGGESPPIGLAPPLTLSPSS
HHAHQLSALARKLASNNNSGSASPASLAPSVTNIKQEPLDPFNSVTPSNGSGFVWAGVAD
KWPPASCSTPCGSSLSPDSAIQKLKAAANAVLQDKNAVASSSTTSSSSSTSASSAVPALG
GGGRGDDVVRFDAFNSPFSPQSASSTLAALSKKVSERSQASSTASAAPDHQASASSFLSL
VSMTSSAALLKEVAARAAGNLLAEKKEGSPLTTAGVLQEDVKPLMDKNQKAPTPSTPTQS
LELLLPSTPKGRGKPSSQAGSPEDGGKPFQCPVCGLVIKRKSYWKRHMVIHTGLKSHQCP
LCPFRCARKDNLKSHMKVHQHQDRGETFQCELCPFTSSRHFSLKLHMRCHQHFPRTDVKV
KEELTTDTEGEGSLMGDSGSADLRGTEVSPLHSDSQPQTSPPVEASSNHVHIKEEPQERD
LSVLSPFSICRERPSSSANSLDLPGVGVGVGVRSSPSGPTTASLFSPDITTKTATDLLMK
LSAANQRETLKSPFHLKEEPKVEEALSPRPSSQSQSQVQPSFPATFCQDGPTGAAAATER
PGPLKPREGSPMAKNSLLSQDINVKVASELLIKLSENNKDAQYQKVKVKAEPMEVDPPPA
ELTPPASHLLAFSTLGASEKSEPMSNLPETLARPQKDLFSQDISVKMASELLFKLSEKVS
KANNHKDSNMVGINSPFLDECFRQSPFNSRSKSSSPAEASSSTRAAFHDSEKDDGEPGNG
IAQWRLNEQLFPCPVCGKVFGRQQTLSRHLSLHTEERKYKCHLCPYAAKCRANLNQHLTI
HSVKLVNTDAEQIVSAVTADSAERKNCPYYYSCHVCGFQTELNAQFVSHMSLHVDKEQWM
FSLCCSVCDYVCMEENDMKNHISTGHAGLNSRSPLSETKSTSSSLSALSDSLNSSEGGDL
THGNEELKSLLAPPSSAGSQSSSGSHSGSGTEDKSDKGFECVFCNFVCKTRSMYERHLQI
HLITRMFECDVCHKFLKTPEQLLEHKKCHTVPSGGLKCPFCIYSTNRPAAMECHLKTHCK
MEYRCRICQGLWPDQASLEAHMRGHRLGNHYKCEQCGYLSKTANKLIEHVRVHTGERPFH
CDRCSYSCKRKDNLNLHKKLKHAPRQTFGCQECPFTTTHPFVFSRHLKKHQSGGAGGLDG
GLGGGGGGGEEEEEDEEAGEEELPLKGTSPGGSSLRRSQEKFLFGGGGGSSGGSGSNSPL
MSLTASQALQSVALSLTLGKSHQLDPRGPLHCLVSTNGNDAIRNPDGPSSGSPSLFLPSS
RHMFEQYRNCDRAHLIPLTTLFTHNSRFTFHSHLHSRWRPATSPLLFSSNSASPSRSPAS
PTSHKHSFLAYLGLMERAKTV
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggaggaagcaggagcaacccaagcgcctgccttcacatgtggacagcaatgag
gaaggagggcctgacagcggtcctgtggaggaggaggcctggtttgggaatgcttctgac
acacgttcagagtcgtcatcctatggagatacccaggatgagctccttctgcccagaggc
tcctctcctgatgaacgacctggagtcagcactgggtctgcagaccacgatacctgtgga
ggtgagagctcaatgggttgccccacacccatccatcgtgcctctttggaacttcttggt
ctggatggaggtgcattctcggcccaggacacactctcctctgtggtgtcatcactgtat
ggtgaggcagcgtcccgagccctgggaaaacccctcagcagtaacctacgacgcctccta
gaggctgggtcgctgaaacttgacactggggacctcctgggccggtcatccaggggaggt
gctggaggggagtctcctccaattggtctcgccccacccttgaccctctccccgtcttcc
caccatgcccaccagttaagtgctcttgcccgaaaactggccagtaacaacaacagcggc
tcagcctcaccagcctccttggcaccctcagtcaccaatattaagcaagagccccttgac
ccctttaactctgtcactcctagcaacggcagtggctttgtatgggcaggtgttgcagac
aagtggccaccggccagctgctccacaccctgcggctccagcctgtccccggactctgca
atccagaagttaaaagcagcagcaaatgctgttcttcaagacaagaatgccgtggcctca
tcctcaacaacttcttcctcctcctccacctctgcctcatctgcagtgcccgccctcgga
gggggtggtcgaggagacgatgtggtgcgctttgatgccttcaactctccatttagccca
cagtcagctagctccaccctcgctgcactttccaagaaagtcagtgagcggagccaagcc
tcatcaacggcaagtgctgctcctgaccaccaagcctcagcaagttcctttctctcactt
gtgtcaatgacctcctctgctgccttgctcaaagaggtggcagccagggcagcaggaaac
ctgctggccgagaagaaggaaggttcccctttgacgactgcaggggtcctccaagaggat
gtgaagcccctgatggacaagaaccagaaggcccccacaccctctacacccacccagagc
ctagagttgcttttgccctctactccaaagggcagaggcaaacctagcagccaagcaggc
tctcctgaggatggtggcaaaccattccagtgtcctgtgtgcggactggtcatcaaacgc
aagagctactggaagagacacatggtcatccacacaggcttaaaaagccaccagtgtccc
ctgtgtcccttccgctgtgctcgcaaagacaatctcaagtcccacatgaaggtacatcag
caccaggaccggggtgagacgtttcagtgtgaactttgccccttcacctcttcccgtcac
ttcagcctgaagcttcacatgcgctgccaccagcacttcccccgcacagacgtcaaggtg
aaagaggagctcaccaccgacacagagggcgagggctccctgatgggtgacagcggctcc
gcggacctgagggggacggaggtgtccccgctgcactcagactctcagccgcagacgtcc
cctccggttgaggcttcctccaatcatgtccacatcaaggaggagccacaggagagagac
ctgtccgtgctctccccctttagcatctgcagggaacgtcccagcagcagcgccaactct
ctggacctacctggagttggggttggagtcggggtcagatccagtcctagtggtccaacc
acagcctccctcttcagccctgacatcacaaccaagacggccactgatctgcttatgaag
ctatcagctgccaaccagagggagacactcaagtctccattccacctgaaggaagagccc
aaagtagaggaagcactgagccctagaccatcctcccagtcccagagccaggtccagcca
agcttccctgcgactttttgccaggatggaccaacgggggctgcagcagccacagagcgc
ccagggcctctcaaaccaagggaaggaagccccatggctaagaacagcttgctgagccag
gatatcaacgttaaggtagcctctgagctgctgatcaagctttcagagaacaacaaagat
gcccagtaccagaaggtgaaagtaaaggcagagcccatggaggtggacccgccccctgca
gaactcaccccacctgcctctcacctgttggccttcagcactttaggggcgagtgagaag
agtgagccaatgagtaacctccctgagacgttggcccgcccccagaaagatctcttctcc
caggacatatcggtcaaaatggcctcggaactactgttcaaattgtcagaaaaagtcagc
aaagccaacaaccacaaagacagtaatatggtggggataaacagtccattcctggacgag
tgcttcagacaatcgccctttaactcgcgctccaagagctcttcccccgcagaggccagc
tcctctaccagggcagcattccatgactcagaaaaggatgatggggagccaggaaacggg
attgcccagtggagactaaatgaacagctcttcccctgtccggtctgtggcaaggtgttt
ggtagacagcagacgctttctagacatctgtctctacacacagaagagaggaagtacaag
tgtcacctgtgtccttacgcagccaagtgcagggctaacctcaatcagcacctgaccatc
cactctgtcaagctggtcaacacagacgcagagcagatcgtcagcgctgttacagccgac
tctgccgagcgcaagaactgtccctactactacagctgccatgtgtgtggtttccagacg
gagctgaatgcccagtttgtcagccacatgtcgctccatgtggacaaggagcagtggatg
ttctcgctctgctgcagcgtctgtgactacgtctgcatggaagagaatgacatgaagaac
cacattagtactggacatgcaggtctgaactccagaagtcccctcagcgagaccaagagc
acctcctcatccctctcggccctcagcgattcactcaacagctcggagggcggagacctc
acccacggtaacgaagaactcaagagcctgctcgcccccccctcctccgcaggcagccag
tccagctccggaagccactcgggatcaggaactgaggacaagtctgacaaaggcttcgag
tgtgtattctgcaactttgtgtgcaagacacgtagcatgtacgagcgacacctccagatc
cacctcatcacgcgaatgtttgagtgtgacgtctgccacaagttcctcaagacacccgaa
cagctgctggagcacaagaagtgccacaccgtcccctccggagggctcaagtgccctttc
tgcatctactccaccaatcgtccagcggccatggagtgccaccttaagacgcactgtaag
atggagtaccgctgccgcatctgccagggactgtggcccgatcaggcctcattggaggcc
cacatgcgcgggcaccgcctgggcaaccactacaagtgtgagcagtgtggctacttgtcc
aagacggccaataagctgatcgagcatgtgcgtgtgcacacgggcgagcggcccttccac
tgcgaccgctgctcttatagctgcaagcgcaaggacaacctcaacctgcacaagaagctg
aagcacgcgccgcgccagactttcggctgccaagagtgccctttcaccaccacacacccc
tttgtcttcagccgccacctcaagaaacaccagagtggaggagcggggggactggacgga
ggcttaggaggaggaggagggggaggagaagaagaggaggaagatgaggaagcaggagag
gaggagctgcctctcaagggaacgtcgccagggggctcgtcgttgcggaggagccaggag
aagttcctgttcggcggaggaggagggagcagtggaggaagtggaagtaacagccccctc
atgagtctaacagcgtcccaggcgctccagtctgttgccctgtcactcacactgggcaag
tctcaccagctggaccccagaggccctctgcactgcttggtcagcactaacggcaacgac
gccatcagaaatcccgacggtccgagcagcggcagcccctccctcttcctcccctcctcc
cgccacatgttcgagcagtacaggaactgcgaccgtgcgcacctgatccccctcaccacc
ctgttcacccacaacagccgcttcacattccactcgcacctccactccagatggcggccc
gccacatctcctctcctcttctcctccaactcggcctccccctcccgctctcctgcctcc
cccacctcccacaaacactccttcctggcctacctgggactgatggagagggccaagact
gtttga
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integrated database retrieval system