KEGG   Lates calcarifer (barramundi perch): 108895925
Entry
108895925         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor 7-like 1-A
  KO
K04490  transcription factor 7-like 1
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04310  Wnt signaling pathway
lcf04520  Adherens junction
lcf04916  Melanogenesis
lcf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    108895925
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    108895925
 09150 Organismal Systems
  09152 Endocrine system
   04916 Melanogenesis
    108895925
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108895925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lcf03000]
    108895925
Transcription factors [BR:lcf03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG TCF-1
    108895925
SSDB
Motif
Pfam: CTNNB1_binding HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 108895925
NCBI-ProteinID: XP_050928688
LinkDB
Position
LG9:complement(259425..274742)
AA seq 584 aa
MPQLNGGDGDDLGANDELIAFKDEGEQEEKRNVSAERDLDDVKSSLVNESESSSDSEADR
RPKPDPDLESRARHSQLFEEALRRQQDGGGLFQPSPYVGYPFFMIPDLGNLCSPYLTNGA
LTTSARTYLPFQWPLLDVPGRSAIRDSATPTHLSNNMPVVQHPHMTHLHPLLSYSPEAFS
PQRASPGFSPDTGMSRTPHAACYPVSPGGMAQIPHPLGWLPGQPMYPITGGFSPAALSSL
VSSGFSPRLVPXPQSSIPHPAIVPTGVKQEPGCSSQPGKSLPDAQQEKEDEKKPHIKKPL
NAFMLYMREERPKVVAQCKVKESATINQILGQRWHSLSKEEQAKYYELARKERLLHSKLY
PGWSARDNYGKKKKRKRAKSETLLEAPAAEDFSPQLKRPRAPPGPEETPPAHTLLTQPHP
QTAHTHARPHLTQPHTISHLTHTHLSQASPASSLDSPATPTTALASPAAPAPTHTEHTHS
SYGGHTSPYGEQLQPLSLTTKPHRTPHPLSRNTVTPGPSTPSSSSDTPTSSPLTASSRSS
PLPPPLLSQPFLVPPPTSAHQSAASSHGAFTQSQPFLLRRTNQL
NT seq 1755 nt   +upstreamnt  +downstreamnt
atgccgcagctaaacgggggagacggagacgacctgggagcaaacgatgaactgatcgct
tttaaagacgaaggggagcaggaggagaagagaaatgtgtccgctgaaagggacctggac
gacgtcaagtcatctctggtcaacgagtcagagagcagctcggactcggaggcagacaga
cgccccaagcccgatccagatctggagagcagggccaggcacagtcagctgtttgaagaa
gcgctgaggaggcagcaggacggcggaggtcttttccagccctcgccgtacgttggatat
cccttcttcatgatcccagacctcgggaacctctgtagtccctacctcaccaacggagcc
ctcacaacaagtgcccgcacgtacctgccgtttcaatggcctctgctcgacgtccccgga
agatcagccatcagagactctgctactcccactcacctgtctaacaacatgcctgtagtg
cagcacccccacatgacccacctccacccactgctgtcctacagcccagaggccttctcc
cctcagagggcctcacctggcttctccccagacacaggtatgtcgaggacacctcatgct
gcctgctaccccgtctctcctggaggcatggctcagatcccacaccctctcggatggctg
ccgggacagcccatgtatcccatcacgggggggttctcacctgctgctctgtcaagcctg
gtgtccagtggtttctctccacgtctggtgcccnacccccagtcgtccatccctcacccg
gccatcgtccccacaggagtgaagcaggagcctggatgcagcagccagcctgggaagtcg
ctgcctgacgctcagcaggagaaggaagacgagaagaagcctcacattaaaaaaccactt
aatgcttttatgttgtacatgagggaggagaggcccaaggtggtggctcagtgcaaggtg
aaagagagcgccaccatcaaccagatactgggacagagatggcactctctgtcgaaggag
gaacaggccaaatattacgaactggctcgtaaagagagactcctccactccaagctgtac
cccggctggtcagccagagacaactatggtaaaaagaagaagaggaagagggccaagagt
gaaactctgctcgaagctcctgcagcagaggatttctccccgcagctgaagagacctcgc
gccccccctggacctgaggagacgccccccgcacacactctgctcacgcagcctcaccca
cagactgcacacacacacgcccgcccccacctgacgcagccgcacaccatctcccacctg
acgcacacgcacctgtcgcaggccagccccgcctcctccctggactccccggccacaccc
accacggcgctggcgtcgcccgcagctccggccccgacgcacaccgagcacacacactcc
tcctacggcggacacacgtcgccctacggcgagcagctgcagccgctgtccctcaccacc
aagccccacaggaccccccaccccctgagccggaacaccgtcactccgggaccctccacg
ccgtcctcgtcctccgacacccccacctcctcacccctcacggcttcgtccaggagctca
cccctccctccccctctgctctctcagcctttcctcgtcccgcctcctacctccgctcac
caatcagcagcgagctctcacggtgcctttactcagtcgcagccgttcttactgagaaga
accaatcagctgtga

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