Lates calcarifer (barramundi perch): 108896162
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Entry
108896162 CDS
T04895
Symbol
pcare1
Name
(RefSeq) LOW QUALITY PROTEIN: photoreceptor cilium actin regulator
KO
K24165
photoreceptor cilium actin regulator
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108896162 (pcare1)
04812 Cytoskeleton proteins [BR:
lcf04812
]
108896162 (pcare1)
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
108896162 (pcare1)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
108896162 (pcare1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retinal
Motif
Other DBs
NCBI-GeneID:
108896162
NCBI-ProteinID:
XP_018550704
UniProt:
A0AAJ7VF73
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All DBs
Position
LG19:complement(4813856..4818949)
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AA seq
1167 aa
AA seq
DB search
MGCSPSKGNNFGTLGPTRKSRMLPPAPQESPRQSQFEDRENHNSTASTDGDTKEKKTAGQ
TQVFQKEAHMTPQKKRSVTEXLHQKAVSMDKLGTLVMDNTVSQRKEKTSDKQDVTEKKPG
RKPKKNIRGAKILKKKDKDKLSAEQKVDFPEPLVKAHQAAYAFLNPSINKYDVLLGLLEQ
AAQTQVSVQPMVAFMALRYEEIIQGLEEIADEGEKVLKENGEHLAWPSQMKNLSSSPPLK
SGSANIEPPPDLLQQLLQYTTQRMRNVGQTVGGIGDSALEEAAEYFASVSELLEEKLKVK
RAVETRLMQLLSRIEMASLRKPGPEDCALFSEDSGIGAESESLAGSERRHRRESWESTGT
NRTTPVSPMGYTSTNFRKGVSRQKFLSQISPSVSLTSLNSLGSTCTIMANDQRDSLLGSV
SLDDGEEEDNDDDEEEEMGETQVRFRKRSNSSPVNREQHPRRLPPKRIENPQNVEMTLKM
KNAISGRIQFIPSQNPSAKTKVAGSPKTSRRQWADEEERSPRRPQTAALVRRAVVKKTPV
SREQRSRSAESLRSKGEDHTLLELERTQKDLNQRLQRMSKSKAAVNTRTAPSKQNQGNSP
AQSPAINRKHPSLEKNSNPQQLKDKADLKRCNNRKQEVTSDVEDDKQKNKKISKGPVKAT
PPPSPPSSPRPSSGLHRGRNSVRKLIDTFSQGIEELDSPKVLGPLKGVRKCGVPVLPGLG
NMEAVLSAGITSCRSESISSEKTDDLDLDSLPPPPLEVLMDNSFEGAQSLSTSVADDGAT
KVGKSPVLKRTVVSQRLRASVQSVTVLPSKGGLPQASKVISLARADQQHTSTPSKVIQPD
AQLEAEPGKEKDSLYQQARKIIHLRHSSDSQKERSSTSYIETNPPASQEESTDSQNGGNL
SVPGPNTMVSVSTLPPSSVVTSQPPATPPKSRGRMLPSTPSTPSSLHRRLPSPHNFKRQP
TPPSSASPPVSRKLPTPAAERRLPSPPVAKQNILSSNSTSSYPFKAPSPPASPKVQRWSR
ENSSEDSSSTRMTNNARSVFCPASPSLFEAQPFSVPRPPQAWTSTGMSFLSRPLGSRARF
PVSVQGPRPFIRRSHSDRRPSLSLPPRSPGISVAETCGSEPAICSQGLDDEPTRDEELWG
SQSDLRATPRSASHPDLCVVGQALYRD
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgggctgctcaccatccaagggtaacaattttgggactcttggtcccacaaggaagagc
aggatgctgcctcctgcacctcaagaaagccccagacagtcccaatttgaagacagagag
aatcataattcaactgcatctacagatggggatacaaaggagaagaagacagctggacaa
acccaggtatttcaaaaagaggcacatatgacaccacaaaaaaagagatctgtgactgag
nncttgcaccagaaagcagtaagcatggataaactggggactttagtaatggacaacaca
gtgtcccagaggaaagagaaaacttctgataagcaagatgtaacagagaaaaagcctggt
agaaaaccaaagaaaaacatcagaggtgcaaaaattcttaaaaagaaagacaaagacaaa
ctatctgcagagcaaaaagtggacttcccagagcctctggtaaaagctcaccaagctgct
tatgcctttctgaatcctagtataaacaaatatgacgttctgcttggacttttggaacaa
gcagcccaaactcaggtttctgtgcagcctatggttgcttttatggctcttcgctatgag
gaaataattcagggactggaagagatagcagatgagggagaaaaagttttaaaagaaaat
ggagaacatcttgcttggccaagtcaaatgaaaaacctctcatcttctccacctctgaag
tctggctctgctaatattgagcccccaccagatttgttgcagcagctgcttcagtacacc
acacagagaatgcgaaatgtgggccagactgttggtggaattggggactctgctttggag
gaggcagcggagtactttgcctcagtctcagagcttttagaggaaaaactgaaagtcaaa
cgtgcagtagagactagactaatgcaactcttatcacgtattgaaatggcctctctgcgc
aaacctgggccagaggactgtgctctgtttagtgaggacagcggtattggggctgagagt
gaatcacttgctggatctgaaagacgccatagacgagagagttgggagtccactggaaca
aatagaactactcctgtcagtcctatgggatacacctccacgaattttaggaaaggagtt
tcaaggcaaaagtttctaagtcaaataagtccaagtgtttccctcacctcactcaactca
ctaggttctacatgtaccataatggctaatgatcaaagggactcattactaggatcagtc
tccttagatgatggggaagaagaggacaatgatgatgatgaggaggaggaaatgggagaa
acacaagttcggtttaggaagcgatcaaattcttcacctgtaaaccgtgaacaacaccca
cgccgcttacctccaaagcgcatagagaatcctcaaaatgtagaaatgactctcaaaatg
aaaaacgctataagtggtaggatacagtttatcccatcacagaaccctagtgccaaaaca
aaggtagcaggcagcccaaagaccagtagacgccagtgggcagatgaggaggaacgatct
ccaaggaggcctcaaacagcagcacttgtacggagggcagtggtaaaaaagaccccagtg
tccagagagcaacgctccaggtcagcagaatccctgcggagcaaaggtgaagatcatact
ctgcttgaattagagaggactcagaaggatttaaaccagaggttgcagaggatgagtaaa
agcaaagcagcagtaaacacaaggactgctccatctaagcaaaatcaaggaaactcacca
gcacagtctccagcaataaatcgcaagcatccatcactagaaaagaacagcaatccccaa
caacttaaagacaaagcagacttaaaaaggtgcaacaatagaaaacaggaggtaaccagt
gatgtagaagatgataaacagaagaacaagaaaatatccaagggtcctgtaaaagccacc
ccaccccctagtcctccctcatcaccaagaccatcctcaggtcttcacagaggcaggaat
tcagtcagaaaacttattgataccttcagtcaaggaatagaggagcttgacagtcctaaa
gttctggggcctctcaaaggagtacggaaatgtggtgttcctgtgttacctgggttagga
aatatggaagccgtgcttagtgctgggataaccagctgtaggtctgaatccatctcatct
gagaaaactgatgatttagatctggatagtcttcctccacctccactggaagtattaatg
gacaattcttttgaaggggcccagagtctttcaactagtgtagcagatgatggggctaca
aaagttggcaaatcacctgtgctaaaaaggactgtagtatctcaacgactgagggcctca
gttcagtcagtgacagtgctgccaagcaaaggaggcttgccacaagcttccaaggttatt
tcccttgctagagcggatcaacaacacacatctactccatcaaaagttatccagccagat
gctcaactggaagcagagccaggaaaggaaaaggattctttgtaccagcaagccagaaag
attatacacctaagacactcctcagactctcagaaagagagatcatcaacaagttacata
gagaccaatcctcctgccagtcaagaagaatcaacagactctcaaaatggtggcaacctt
tcagtgcctggacctaacactatggtgtctgtgtctacattgcctccttcctcagtagtc
actagccaaccacctgccaccccacctaagtctagaggtcgaatgttaccatcaacacct
tctacaccaagcagcttgcatcgaagacttcctagtccccacaatttcaaaagacagcct
actccaccatcttcagctagcccccctgttagcagaaaactccccacaccagcagctgag
aggaggctccccagcccacctgttgcaaagcaaaacatcttaagttcaaactcaacctcc
tcgtatcctttcaaagcaccgtctcctccagcctcaccaaaagtacaaagatggtcaaga
gagaacagcagtgaagactcatctagtactcggatgaccaataatgcacgttcagtcttc
tgccctgcatctccatccctgtttgaggcccagcctttttcagttccccgaccccctcaa
gcatggacctctactgggatgtcttttctctcacgtcctttgggaagtcgtgcaaggttt
cctgtatctgttcaaggacctcgacccttcatccgacgtagtcattcagatcgaaggcca
agtctaagtctgccaccaagatcaccaggcatctcagtggctgagacttgtgggagtgaa
ccagcaatatgttcacaggggctggatgatgaaccaaccagggacgaggaattatggggt
agccaatcagaccttagagctacgccacgttctgcatcacaccctgacctgtgtgttgtt
ggtcaggccttgtacagggactaa
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