Lates calcarifer (barramundi perch): 108896327
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Entry
108896327 CDS
T04895
Name
(RefSeq) succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00020
Citrate cycle (TCA cycle)
lcf00640
Propanoate metabolism
lcf01100
Metabolic pathways
lcf01200
Carbon metabolism
Module
lcf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lcf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
108896327
00640 Propanoate metabolism
108896327
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108896327
Enzymes [BR:
lcf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
108896327
6.2.1.5 succinate---CoA ligase (ADP-forming)
108896327
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108896327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
CPSase_L_D2
Motif
Other DBs
NCBI-GeneID:
108896327
NCBI-ProteinID:
XP_018550923
UniProt:
A0A4W6DE91
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All DBs
Position
LG1:complement(1991840..2007710)
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AA seq
462 aa
AA seq
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MATSLICSRLTASLRNSGARNTISSASKVLGGSSGLFGGHVSQPQQQQQRNLSLHEYMSI
GLLKEAGISVPAGLVASSSEEAYAVAKQIGSKDLVVKAQVLAGGRGKGTFEGGLKGGVRI
VYSPEEARDISSQMIGRKLYTKQTGEAGRICNQVFICERRYPRREYYFAITMERSYQGPV
LIGSSQGGVNIEDVAAENPDAIVKEPIDIVEGIKMEQAIKVAQKMGFPPALVNEAAENMV
KLYNLFIKYDASMVEINPMVEDSSGIVMCMDAKINFDSNAAYRQKKVFDMQDWTQEDPRD
RQAAKADLNYIGLDGTIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATAHQVTEAF
KLITSDRKVQAILVNIFGGIMRCDVIAQGIIMAVRDLDLKIPIVVRLQGTRVDDAKALIA
ASPLKILACDDLDEAAKMVVKLSEIVSLAKEAQVDITFQLPI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtccctgatctgcagccgtttgacggccagcctgagaaattcaggggccagg
aacacgatcagctccgcttccaaggtcctgggtggatcttcaggtctgtttggaggccat
gtgtcccagcctcagcagcagcagcagaggaacctctccctacacgagtacatgagcatc
gggctcctcaaagaggccggcatctcggtgcccgccggcctggtggccagctcctcggag
gaggcctacgccgtggctaagcagattggttcaaaggacctggtggtgaaagctcaggtt
ctggctggtggcagagggaaggggacgttcgagggcggactgaagggaggagtgaggatc
gtctactccccagaggaggcccgcgacatctcgtcccagatgattggtcgaaagctgtac
accaagcagaccggggaggccggtcgaatctgcaaccaggtgttcatctgtgagcgcagg
tacccacgcagagagtactacttcgccatcaccatggagaggtcctaccagggccccgtc
ctgatcggcagctcgcaggggggcgtgaacatcgaagacgtcgcagcagaaaatccagac
gccattgtgaaggagcccatcgacattgtggagggcattaagatggagcaggccatcaag
gtggctcagaagatgggcttccctccagcgctggtgaacgaggcggcagagaacatggtc
aaactgtacaacctgttcatcaagtacgacgcctccatggtggagatcaaccccatggtg
gaggactcctctggcatcgtgatgtgcatggacgccaagatcaactttgactccaatgcg
gcataccgccagaagaaggtgtttgacatgcaggactggacccaggaggacccccgagac
cggcaggccgccaaggccgacctcaactacatcggcttggatggaacaatcggctgcctc
gtgaacggagcaggtctggccatggccaccatggacatcatcaagctccacggcggcacg
cccgccaacttcctggatgtgggaggaggagccacggctcatcaggtgaccgaggctttc
aaactcatcacgtctgacaggaaggtccaggccatcctcgtcaacatcttcggcggcatc
atgaggtgtgacgtcatcgcccagggcatcatcatggctgtgagagacctggacctcaag
atccccatcgtagtgcggttacaagggacgagagtggacgatgctaaagctctgatcgct
gccagtccactgaaaatcctggcctgtgacgacctggacgaagccgccaaaatggttgta
aagctttctgaaatcgtctctctggctaaagaagctcaagtggacatcaccttccagctg
cccatctaa
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