Lates calcarifer (barramundi perch): 108896393
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Entry
108896393 CDS
T04895
Symbol
tpm3
Name
(RefSeq) tropomyosin alpha-3 chain
KO
K09290
tropomyosin 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04260
Cardiac muscle contraction
lcf04261
Adrenergic signaling in cardiomyocytes
lcf04814
Motor proteins
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108896393 (tpm3)
04820 Cytoskeleton in muscle cells
108896393 (tpm3)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108896393 (tpm3)
04261 Adrenergic signaling in cardiomyocytes
108896393 (tpm3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108896393 (tpm3)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
108896393 (tpm3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
TMF_DNA_bd
Lebercilin
ATG16
DUF745
DUF3450
CENP-F_leu_zip
PUMA_CC
XhlA
Crescentin
SlyX
Laminin_I
DUF16
Fez1
BORCS7
Motif
Other DBs
NCBI-GeneID:
108896393
NCBI-ProteinID:
XP_018551032
UniProt:
A0A4W6CXB1
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MEAIKKKMLMLKLDKENALDQAEQAEADKKAAEDRSKQHEDELLQMQKKLKGTEDELDKY
SEALKDAQEKLEVADKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIVEGELERTE
ERAELAEAKCAELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatcaaaaagaagatgcttatgctgaagctggacaaggagaatgcactggac
caggcagaacaagctgaagcagacaagaaagcggccgaagacagaagcaagcagcatgaa
gatgaacttctgcaaatgcaaaagaagctgaaagggacagaggatgagcttgataaatac
tcagaggccctgaaggatgctcaggagaagcttgaggtggcagataagaaggctgctgat
gctgaggcagaagtggcttccctgaacagacgtatccagctagtggaggaggagttggac
cgagctcaggagagactggcaacggctctgcagaagctggaagaagctgagaaggctgct
gatgagagtgagagaggtatgaaggtgattgagaacagggctctaaaggatgaggagaag
atggagctccaggagattcagctgaaggaggctaaacatatcgcagaggaagctgaccgc
aaatatgaggaggtggctcgtaagctggtgattgtagaaggagagctggagcgtacagag
gaaagggcagagctggctgaggctaaatgtgctgaactggaggaggaactgaagaacgtc
accaataacctaaagtctctggaggcccaggctgagaagtactctcaaaaggaggacaag
tatgaggaagagatcaagatcctaactgacaagctgaaagaggctgagacccgagctgag
tttgcagagagatctgtggccaagctggagaagactattgatgatctggaagatgagctt
tatgcacagaaactcaagtacaaagccattagtgaggaactggaccacgccctcaatgac
atgacctccatctaa
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integrated database retrieval system