Lates calcarifer (barramundi perch): 108896959
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Entry
108896959 CDS
T04895
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108896959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108896959
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
108896959
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
108896959
NCBI-ProteinID:
XP_018551824
UniProt:
A0A4W6CUM7
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Position
LG17:complement(610213..620261)
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AA seq
740 aa
AA seq
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MRRSLAPSQVAKRKQAGDSCEDEDWTYRTEKRRKGDNETRENHISPFRKPLTQLNDRPPC
MDGDKHEAFIRSILSKPFKIPILNYTGSLGIRALGLKRAGVRKALHDPFAEDALVLYEPP
TLSAHDLIKADKEKVPVHVVVDPVLGKVLRPHQREGVKFLWECVTGRRISESYGCIMADE
MGLGKTLQCITLMWTLLRQSPDAKPEIDKAIVVSPSSLVRNWYNEVGKWLGGRVTPVAID
GGSKDEIDRQLVNFMSQHGLRVPTPILIISYETFRLHAGVLHKGKVGLVICDEGHRLKNS
DNQTYQALNAMSAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKG
RDADASDKDRQTGEEKLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELY
KRFLRQAKPVETLQEGKISVSSLSSITSLKKLCNHPALIYEKCVEGEEGFEGALDLFPPG
YCTKAVEPQLSGKMLVLDYILAITRTTTSDKVVLVSNYTQTLDLFEKLCRSRRYLYVRLD
GTMSIKKRAKIVERFNSPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAM
ARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELREL
FALNEETASDTHDKFRCQRCVNGREVRPPAEDSDCTSDLSQWNHCFSKKGLRDQVLKASW
DAAVSFVFHQRSHEDQRGVL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggagtcttgctcccagtcaggttgctaaacggaagcaagcaggggattcctgc
gaagatgaagattggacgtacagaactgagaaaagaagaaaaggtgataatgagacaaga
gagaaccatatttctcccttcagaaaacctctgacacagctcaacgaccggcctccatgt
atggatggtgacaaacacgaagcatttattcgaagtatcctctccaaaccgtttaagatt
cctattctaaactacacaggctcgctgggaatcagggcacttggtctaaagcgtgcagga
gtaaggaaagcgcttcacgatcccttcgcagaagatgctttggttctttatgagcctccg
actctgagcgctcatgacctgatcaaagctgacaaggaaaaagtacctgtccatgttgtt
gtggatccagtcttaggaaaagtgctcagaccccatcagagagagggagtgaaattcctg
tgggagtgtgtgacaggccgacgcatctcagaatcatatggctgcatcatggctgatgag
atgggcctggggaagactttacagtgtatcactctcatgtggaccctgctacgccaaagc
cctgatgctaagccagagatagacaaagccatcgtggtctcaccttccagtctagttcgc
aactggtacaatgaagtcggaaaatggctgggaggacgcgtgacaccagtggccatcgac
ggaggttcaaaggatgagatcgatagacagttagtgaacttcatgtctcagcatggtttg
agagtcccgaccccaatcctgatcatttcatatgagacatttcgactgcatgctggggtt
ctgcacaaaggcaaagtcggacttgtcatctgtgacgagggccatcggctgaagaactca
gacaaccagacgtaccaggccctgaatgccatgagtgcccagaggagagtgctgatatca
ggcactcccatccagaatgacctgctggagtacttcagcctggtccactttgttaatgct
gggattcttggtacagcccaggagtttaaaaaacgttttgagcttcctatcctcaagggc
agagatgcagatgccagtgataaagacagacagacaggagaggagaaactcaaggaactg
atcagcatcgtcaacaggtgtttgattaggagaacatctgatatcttgtctaagtacctt
cctgtgaaaattgagcaggttgtgtgttgcagactgactcctctgcagacagagctctat
aagcgcttcctgagacaggccaaacctgttgagacattgcaggagggaaaaataagtgtc
tcctccttgtcctctatcacgtcactgaagaaactgtgcaatcacccagcacttatctat
gagaagtgtgtggagggtgaggagggctttgagggggcactggatctgtttccacctggc
tactgcactaaagctgtggagcctcagctctctgggaaaatgctggttcttgattacatc
ctggcaataacaaggacaacaactagtgacaaagtggtgcttgtctccaactacactcaa
acactggacctctttgaaaagctgtgcagatctagaagatacctctatgttcgactggat
ggcacaatgtccatcaagaaaagggccaagattgtggaaagattcaacagtccctctaac
ccagagttcatcttcatgctgagcagcaaggctggtggatgtggcctgaatctgattggt
gctaatcgcttggtgatgtttgatcctgactggaacccagccaacgatgagcaggcaatg
gcgcgggtgtggagagacggacagaagaagacctgctacatctacagactgctctctaca
gggacaatcgaggagaagatcctgcagaggcaggcccataagaaagctctgagcagctgt
gtggtagatgaggagcaggacgtggaacgtcacttctctctgggtgaactccgagaactc
ttcgctctcaacgaggagaccgccagcgacacacatgacaagtttcgctgtcagcgctgt
gtgaacggcagagaggttcggcctcctgcagaggactctgactgtaccagtgacctttct
cagtggaaccactgcttcagcaagaagggcttgagggaccaagtgttgaaggcctcctgg
gacgctgcggtctccttcgtcttccaccagcgctctcacgaggaccagagaggtgtacta
tag
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