Lates calcarifer (barramundi perch): 108898222
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Entry
108898222 CDS
T04895
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3
KO
K04953
cyclic nucleotide gated channel beta 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108898222
Ion channels [BR:
lcf04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108898222
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GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
DUF3807
DUF4746
DDHD
AAA_11
Piezo_TM25-28
EIIBC-GUT_N
Motif
Other DBs
NCBI-GeneID:
108898222
NCBI-ProteinID:
XP_018553647
UniProt:
A0AAJ7VH50
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Position
LG24:521993..532771
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AA seq
755 aa
AA seq
DB search
MFGKLKGLLSGPQVSAAPGTTSVAPAPAPAPAPAPAPAPAPAKEEKAADKENEAKKVDKP
QGSTPAPAQAPAPAAAPGPAPAPAPAPAPAPPPGPTAAPTNPDQAGPEGQEAAPPPPPPI
VINRYSDDQLRAIVKRMRERLEIYKEKVVDQYASSPEISPPVTPLLRKDNYTKVIEERKR
QAEEERIKKEEAEKKKKEEQEKKKKEDEQKKKEEEEKKKIEGKDEKKEVKVALKTRLTSA
VWRSVDMVLKPIEDSMDSVVGQTIDPFTDRRYIAWLSLVTLAFNYNTWFTTARLCFPYHT
ESAIPYWFALDLLADLIYFTDSIIFQPRKQFVKGGDIIKDRVLTKKNYRDSERFKADMMS
LIPFDLLYLQFGFKSIFRANRLMRADTFFEFSDRLESIMAKAYIWRVIRTIGYLLFMLHL
NACFYYVASDYQGIGKTKWVYSGLGSAYLSCFFYAEKSLLMIGELPIPDSMFGQIFQMTN
YLFGAFFMSIILGQMRDVIGAATAGQTYFRSSMDSTVAYMVTNRIPSLVQNRVRTWYTYT
WDAQGMLDESELLDKMPLVMKTAIAVDINLATFQKIDLFKGCDQQMLVDMLLRLKSIIYL
PGDFVVKKGDIGKEMYIIKSGAVQVVGGPDNSIVFVTLKAGCVFGEISLLQSSKDGGNRR
TANVKAYGFANLFVLEKKDLFDILVHYPESQKVLARKGRKLMKAKGPAAAKAEEDKKKGL
ALFGPRPGTPKLLRAVGGTINKGIIDRLKSAAAGQ
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtaagttgaagggcctcctcagtgggccacaggtgtcagcggctcctgggacc
accagcgtggctccagctccagctccagctccagctccagctccagccccggctccagct
ccagccaaggaggagaaggcggccgataaggagaatgaggccaagaaagtggacaaaccg
cagggatcaactccagccccggcccaggctccagctccagctgcggccccaggccctgct
ccagccccggctccagctccagccccagccccacctccaggccctactgcagctccaact
aaccctgatcaagctggacctgagggacaggaggcagcccctcctccacctccacccatc
gtcatcaacagatactcagatgatcagctcagagccatcgtcaaacggatgagagagaga
ctggagatctacaaggagaaagtggtggatcagtacgcctcctcccctgagatcagtcct
cctgtcactcctctgctccgcaaagacaactacacaaaagtgatagaggagaggaagagg
caggcagaggaggagcggataaagaaggaggaggctgagaagaagaagaaagaggagcag
gagaagaagaagaaggaggatgagcagaaaaagaaggaggaggaggagaaaaagaaaata
gagggtaaagatgagaagaaggaggtgaaggtggccttgaagaccaggttaaccagcgct
gtctggcgctctgtggacatggtgctgaagcccattgaggacagcatggactcagtcgtg
gggcagaccattgaccctttcacagatcgccgctacatcgcctggctcagcctcgtcact
ctggccttcaactacaacacctggttcaccacagcccgtctgtgtttcccctaccacact
gagagcgccatcccttactggttcgctctggacctgctggctgacctcatctacttcaca
gactccatcatcttccagccccgcaaacagtttgtcaaaggaggagacatcataaaagac
cgagtgctgacaaagaagaactacagagactcagaaagattcaaggcggacatgatgtcc
ctcattccgtttgacctgctctacctccagtttggattcaaatccattttcagagctaat
cgtctgatgagggcggacacgttctttgagttcagtgatcgtctggagagcatcatggcc
aaggcgtacatctggagagtgattcgcaccatcgggtatctcctcttcatgctccacctc
aacgcttgcttctactacgtagcttcagactatcagggcatcggcaaaactaaatgggtc
tactcgggcctgggcagtgcttacctcagctgcttcttctatgcggagaagtccctgctg
atgatcggtgagctgccgattccagactccatgttcggacagatctttcagatgactaac
tacctgtttggggctttctttatgtccatcattctcggacagatgagagatgtcattggt
gcagccacagcaggacagacctatttccgatcctccatggacagcactgtggcctacatg
gtgaccaaccgcatcccctctctggtgcagaacagagtccgcacctggtacacctacacc
tgggatgctcagggcatgctggatgagtcagagctactggacaagatgcctctggtgatg
aagacggccatcgctgtggacatcaacctggccacctttcagaagatcgatcttttcaag
ggttgtgaccagcagatgttggtggacatgttgctgaggctcaagtcaatcatctaccta
cctggagactttgtcgtgaagaaaggtgacatcggtaaagagatgtacatcattaaaagt
ggagcggtgcaggtggtgggaggacctgacaacagcattgtgtttgtcacactgaaggct
ggatgtgtgtttggagaaatcagtttgttgcagtcgtccaaagatggaggaaacagacgc
accgctaacgtcaaagcctatggctttgctaacctctttgtcctggagaagaaggacctg
tttgacatcctggtccactacccagagtctcagaaggtgctggccaggaagggacggaag
ctgatgaaggccaagggtccagcagcagctaaagcagaggaggacaagaagaagggtctg
gctctgtttggacccagacctgggacgcccaaactgctgcgtgctgttggaggaaccatc
aataaaggcatcatcgacaggctgaagagtgctgctgctggccagtga
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