Lates calcarifer (barramundi perch): 108901792
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Entry
108901792 CDS
T04895
Name
(RefSeq) tumor necrosis factor receptor superfamily member 21
KO
K05157
tumor necrosis factor receptor superfamily member 21
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108901792
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
lcf04050
]
108901792
04090 CD molecules [BR:
lcf04090
]
108901792
Cytokine receptors [BR:
lcf04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
108901792
CD molecules [BR:
lcf04090
]
Proteins
108901792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
Ephrin_rec_like
CARD
Motif
Other DBs
NCBI-GeneID:
108901792
NCBI-ProteinID:
XP_018558947
UniProt:
A0A4W6EX99
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Position
LG7_1:complement(19589469..19631239)
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AA seq
694 aa
AA seq
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MPAMCVSAVLLYTLVVDISARVLTTTSPADQPVLSPRHYQHTDPDSGTQLVCDKCPAGTY
VSAHCSPTAVRECSPCSEGTFTRGENGVQQCHRCRPPCPAGFIEKAPCTATQDRICTCPP
NSFLSVDSGTECKPHSLCPRGTRVKKRGSETEDVLCKPCTKGTFSDVESSAVKCRTHTDC
QTKGLVLLTPGTRETDNVCGPPPTALSSSSSSSASTTTPLGPAWAVLVQEPLTSSPLSSL
TEPAQKGIYSQSAAIQLKGSPSGEDHRAEGLLLSHPGSPTPVNRDPPRTPPPPARKQPVD
REQQQGQPNSEPVPGPNRQAMEGAEVVRVGISLSKVAEQENGGGGGGISSYYRPTRRGSP
RPSTHNHFDINEHLPWMIVLLLLLVLVVIVVCSVKRSSRVLKKGPMQDPSSIMEKAIQKK
PSAPPTQVKEKWIYYSNGQGVDILKLVAAHVGTQWIDIYQSLANATEREVAAFSNGYSSD
HERAYAALQHWTIRDGDANLAKLINALHRQRRIDVVEKIRCVMEDNPQFDINQLMTSVNV
SQSLSPIHKALESPSSVGSNGGSSSGSSVGGASGIGVEQSPVDRTKGFFPDESEPLLRCD
STSSKDSALSRNGSFITKEKKDTVLRQVRLDPCDLQPIFDDMLHILNPEELHVIEEIPAA
EDKLDRLFEIAGVKSQEASQTLLDSVYSHLPDLL
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccatgtgtgtgtccgcagtgctcttatatacactggtggttgacatctcagcc
cgggttttgaccacaaccagcccggctgaccagcccgtgctctctccccgtcactatcag
cacaccgaccccgattcaggcacccagctggtctgcgacaagtgcccagcaggcacctac
gtgtctgcccactgctcccctacagctgtgagggagtgcagcccgtgttccgaaggcacc
ttcacacggggcgagaacggcgtccagcaatgtcatcgctgtcggcctccgtgtcctgca
ggctttattgagaaagcaccctgcacggccacccaggaccgcatttgcacttgcccaccc
aacagcttcttgtctgtggatagtggcacagagtgtaagccccactcactgtgccctcgt
gggacgagggtgaaaaagcggggcagtgaaacggaggacgtgctctgtaaaccctgcacc
aaggggactttttcagatgtggaatcgagcgcggtgaagtgccgaacccacacggactgc
cagaccaaggggctggtgctgctcacaccagggactagagagacagataatgtctgtgga
ccacctcctacagccctgtcctcctcttcatcctcatctgcctctacaactacccctctg
gggcctgcatgggctgtgcttgtacaggagcccctaacttcttctccattatcatcactg
actgaacctgcacagaaaggcatctacagccagtcagcggcaattcagctgaagggaagc
ccaagtggggaagaccaccgtgcagaggggctgctccttagccaccctggcagtcccacc
ccagtcaaccgtgatcccccaaggactccaccacccccagctcgcaagcaaccagtggat
cgtgagcaacagcaggggcaacccaattctgagcctgtgcctgggcccaacaggcaggca
atggagggtgcagaggtagtcagagttgggatcagtttaagcaaggttgctgagcaggag
aatggaggtggtggaggtgggatctccagctactacaggccaactcgcagggggtcccca
aggccgagtactcataatcactttgacattaatgaacacctgccctggatgattgtgcta
ctgctcctgctggttttggtggtaattgtggtgtgtagtgtgaagcggagctctcgggtg
ctgaagaagggtccaatgcaggatcccagcagcatcatggagaaggcaattcagaagaaa
ccatctgcgcctccaacacaggtcaaagagaagtggatctactattccaacggacagggg
gtggatatcctaaagctggtggcagcccacgtgggcacccagtggattgacatctatcag
tcgttagctaatgccacagagcgcgaggtggctgccttctccaacggctactcgtcggat
cacgagcgggcatatgcggcgctgcagcactggaccatccgggatggtgacgccaatctg
gccaagctgatcaacgccctgcaccgacagcgccgcatcgatgtggtggagaagatccgc
tgtgtcatggaggacaacccgcagtttgacatcaaccagctgatgacctcagtgaatgta
agccaaagcctcagtcccatccacaaggcgctggaatcccccagcagcgttggcagcaac
ggtggtagcagcagtggcagtagcgtgggcggggccagtggcataggtgtggagcagtcg
ccagtggaccgcaccaaaggcttcttccctgatgaatcagagcctttgctgcgctgtgat
tccacctccagcaaagactccgccctcagtaggaatggctccttcattaccaaagagaag
aaagacactgtgctccggcaagtgcgtctggacccgtgcgacctgcagcccatctttgac
gacatgctgcacatcctgaacccagaagagctgcacgttatcgaggagatcccggccgct
gaggacaagctggatcggctttttgagatcgcgggagtcaagagtcaggaggccagccag
acgctgctagactcggtctacagccacctccctgacctgttatag
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