Lates calcarifer (barramundi perch): 108901814
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Entry
108901814 CDS
T04895
Name
(RefSeq) nuclear pore complex protein Nup205
KO
K14310
nuclear pore complex protein Nup205
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108901814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108901814
03036 Chromosome and associated proteins [BR:
lcf03036
]
108901814
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108901814
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108901814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup192
Motif
Other DBs
NCBI-GeneID:
108901814
NCBI-ProteinID:
XP_018558966
UniProt:
A0AAJ7QL00
LinkDB
All DBs
Position
LG10:complement(20090750..20105482)
Genome browser
AA seq
1993 aa
AA seq
DB search
MAAQMAVNSGASLWGPLKELWETVDGAVLRRQPESVHLLDLQLKKHKPSFLSLFKNPPKS
AEQREKVRKASTEGIAIQGQQGSRLLPEQLLTEAFILSDLFDIGELAALELLLAGEQQQP
HFPGLTRGLVAVLLYWDGKLCVANSLRTLIQSRHGKTFTLDLSGELVAFTTRFTDELMSQ
GLTKRILTLVSEISVTREFERLQKERGLGNEKHRKEVSDLIKDCRQALADSLFSWTCQSP
LSKDDTLALIGHLETVTAQADGSLDSVNMALVMALLYCLDVSFIEQGTEDREDLLQALPL
LTERQYVAAVHSRLMDGQSWKLPGLQAVCRLAWALSLRVLSQLPQGSALVEFTEADEALA
DQALLGDVFLFMKEGMLGCETFAQEEFYIRRLHSLITDFLALMPMKVKQLRNRADEDARL
VHMSLQMDSELPSSLRKDLDHLMILIGEFYSRDPFGLELGLEFWCPTESLQHTSLQGSYL
GMALQRPPHKQVVLSKFVRQMGDLLPSTLYISYLRMLKGLANGPQCAHYCFSLLKTNGAT
HSDNIQGVSGSPVSWEHFFHSLMLYHENLRRDLPNPDAAHYRHPPLRGITQRELEGLTSF
LQLLTTIITWSENARLALCEHPQWTPVVVMLGLLQCSVPPVLKAELLHCLAAFGKSPEIA
ASLWQSLEYTQILQTVRAPGQRQAAGIEVELNEIESSCEEYPLTRGFCHLISTLVESSLP
VNLGAGLRVPGFQPYLNFLRDSVFLPFPTRAYRRPAEKWEVADSALEVFHKLLRDYEPQP
SDFVQEMVELQGEQVPAHKPPGHSIMFHLLNDSPMLALCLSLLEEGVRQLDTYAPFPGKK
HLESAVLHCLCLLDLALQKEVVFMDLLRESQASLLVSPLEQLLQGVSPQTRRADHIVSIA
RYLYHSSSNPEAAFQSAKILRRIANYPNIQIRLVGDFTHDQAVSDKLMAGFVECLDNEEA
EEGAEKGDDSDQQKKVARIRHETQIHILNLLITSLELKTPNLALYLLGYEVKKPVSSTNL
QDPGVLGCPRSCLHAILSLLQRGTEKRSGPVLTQQAPHLAELCYQVIYQLCACPDTSGPT
MRYLRTSQDFLFSHLQHLPFILPSNQIAALSQMSWLMKTAAIELRVTSLNRQRSHTQRLV
SLLLDDQPHTQHTADGESGMEEETRSVSGFLHFDTVSKVRRKLLSVLDAIDFSQDMPELL
QLDFFERTQIEQVISNCEHVNEQGHTVCNVKLLHRVLVAEVNALQGMAAIGQRPLLMEEV
NSILQQVVDRNRVRRSLSAKRHALQSWRSLVETLLTACPADLIPADDRQLIIRDLLLDLH
DKVLSEDAAGELMPIVAGAVFTLTAHLSQSVLSEQQQGVGLEASSGFASIANSALHLILR
KLLDFILCTGGGYQRLRAHLYGSLLYYLQIAQKPEEPDTLQTAGKAMWERLTAPEDGFSK
LQRENLAIIESYGKSLMEVVCRDACDGHEISRMLALAVLDRILSIDRQNQWLVYVCNSGY
LRSLVESLRQDDAALQSLLTPQPPLLKPLYIYESKMALLTRVAKTGQGAVELLRCGLVAQ
LMECQVFDMVPDSDAHRVMRDPSGFIPSPMDRYRQILLPTLRLFQVILTSTTMNHQQGAA
QVLQWLIVHADTIQALLRCHELSMGALQELSLLTGIISKTALPGVLEMGGEVNSAALMEF
QGHINRFQRLCLSLLSCLVGSERERLLKQAEISAPGDSAERREEMEVAMQQVCANIMEYC
QTLLLQSSTQAQFSICLFSPSGSEPAGRDGGRADLSSTLPSMAYSRAPSLGLVLYLLKNS
AADFFRFHQSHRQSLSKLQSLDQLPPEELKELCQGLVSGPGGVEKISSVQRSLLAKRRLV
QLINNRAKLLALCSYVIETCLFVLWRHLEYYLLHCTPTDPKDSLLPGASLYRSRLTDDSF
GGLQASGSRGLNLSRVSQQDLDLLKSDMVAGFGEALQRKLLEVEGLYSQVRSRYTFIQAL
VRRIRGLLRQPKS
NT seq
5982 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcagatggcggtaaattcgggagccagtctgtgggggccgctgaaggagcta
tgggagacagtggacggggctgtgctgaggagacagccagagagcgtccacctcctggac
cttcagctgaagaaacacaaaccatcctttttgtcactctttaagaacccgccaaagagt
gcagagcagagagagaaggtgcgtaaagccagcacagaaggcattgccatccagggtcaa
caggggtccagactccttccagagcagcttctgacagaagccttcatcctcagtgacttg
tttgacattggagagttggcagctttggagcttttactggcaggtgagcagcagcagccc
cattttccaggtctgacacgaggcctagtagctgtgctactctactgggatggaaagctt
tgtgtggccaactctttgcgcacgctcattcagtcacgccacggcaagaccttcaccctg
gatctcagtggagagctggtggctttcacaacacgttttacagatgaactgatgagccaa
ggtctgaccaaacgcatcttgaccttggtgtcagagattagtgtgactcgtgagtttgaa
cggctgcagaaggagcgcggcctgggcaatgaaaagcacaggaaggaggtttctgacctg
atcaaagactgcagacaggccttggctgatagcttgttttcatggacctgccagtcaccc
ttgtctaaagatgacaccctggctctcattggtcacctggagacagtgacggctcaagct
gatggctcattggacagcgtgaacatggctctggtcatggcactgctctactgcttggat
gtcagctttatagagcaggggactgaagatagagaagatctgctccaggcactgccttta
ctgacagagaggcagtatgtagctgcggtgcacagtcgtctgatggatggccagtcatgg
aagcttccaggactgcaggctgtgtgtcggctggcctgggctctgtctctgagggttctt
tcccagctaccgcagggatctgccctggttgagttcactgaggcagatgaggctttggct
gaccaggctctactgggagatgtcttcctgtttatgaaggagggcatgctaggatgtgag
acttttgctcaagaggagttttacatccgccgcctccattcactcatcacagacttcctg
gcacttatgccaatgaaggtgaagcagcttcgtaaccgtgcggatgaagacgcccgcctg
gtgcacatgtccctgcagatggacagtgagcttccgtcttcattgcgcaaggacttagac
cacctcatgatcctcataggggagttttacagtagggacccatttgggctggagctgggt
ttggagttctggtgtcccacagagtctctccaacacacttccctgcagggatcctacctt
ggaatggctctacaaaggcctccacataaacaggtggttctgtccaagtttgtgcgtcag
atgggagacctcctgccctccaccctctatatctcctatctccgtatgctaaaaggcctc
gccaatggtcctcagtgtgcccactattgcttcagcctgctgaaaaccaatggagctaca
cacagtgacaacatccagggtgtttcaggcagcccagtgtcttgggaacatttctttcac
tcccttatgctctaccatgagaacctgcgacgagatcttccaaatccagatgctgcacac
taccgccacccaccactgaggggcatcactcaaagggagctggaaggactcacctcgttt
ttgcagttactcaccaccatcattacctggagcgaaaatgctcgattggctttgtgtgag
catcctcagtggaccccagttgtagtgatgctggggttgctacagtgcagcgttccaccc
gtcctgaaggccgagctcctgcactgcctggcagcctttgggaaatcaccagagatcgct
gcttcactctggcagtcgctggagtacacacagattcttcagacggttcgagccccagga
cagaggcaggcagctggaattgaggtggagctgaatgaaatcgagtccagctgtgaggag
taccccctgacacgtggcttctgtcatctgatcagcactttggtcgagagcagtctgcct
gttaatttgggggcagggctacgcgtgccaggcttccagccctacttgaacttcttgcgt
gactctgtgttcctccccttccccaccagagcataccgtcgcccagctgagaagtgggag
gtggctgactctgccctggaggtgttccacaagctgctgcgggactatgagccccagccg
tcagactttgtccaggagatggtggagctgcagggtgagcaggtcccagcccacaagccc
cctggccacagcatcatgttccatctgcttaatgattcgcccatgctggcgttgtgcctc
agcctgctggaggaaggtgtacgccagctggacacttatgcacctttccctggtaaaaag
cacttggagtcagcagtgctgcactgcctgtgcctgctggacctggctctgcagaaggag
gtggtgttcatggatctcctcagggagagccaggcctccctgctggtttcccccttggag
cagctcctccagggcgttagccctcaaacccggagggcagatcacatcgtcagcattgcc
aggtatttgtaccacagcagctccaacccagaggctgccttccaaagtgccaagatcctg
cgtcgtattgccaactaccccaacatccagatcaggctggtgggagatttcacacacgac
caggcagtgagtgacaaactgatggccggctttgtggagtgtctggacaatgaagaggca
gaggagggagcagagaaaggagatgactcagaccagcaaaagaaggtggcaagaatacga
cacgaaacccagatccatattctgaacctgctcattacatccttggagctgaagacaccc
aatctggctctttacctcctgggctacgaagtcaagaagcctgtgtcctccaccaacctc
caggacccaggtgtgctgggatgtccacggagctgcctccatgccatcctgagtctgctc
cagagaggcactgagaagagatcaggacctgtgctcacacagcaggctccacacctggct
gagctctgctaccaggtgatctaccagctgtgtgcctgcccagatacatctggacctacc
atgcgctatttgaggaccagccaggatttcctgttctcacatttgcagcacctgcctttc
atcctgcccagtaaccagatcgctgccctctcccagatgtcttggctcatgaaaacagct
gcaatcgagctgagggtgacttcactgaaccgccagcgttcccacacacaacgcctcgtc
agcctcctgctggatgaccagccacacactcagcatacagctgatggggagtcaggcatg
gaggaagagaccagatcagtcagtggtttcctgcattttgacacagtctctaaagtgcga
aggaagttgctgagtgtgctggacgccattgacttcagtcaggacatgcctgagctattg
cagctggacttctttgagcgcactcagatagagcaggtgatctccaactgtgagcatgtc
aatgagcaaggacacactgtgtgcaacgtcaagttgcttcatagagtgctggttgctgag
gtaaatgccctgcaaggaatggcagccattggacagaggcccctgttaatggaggaggtg
aactccatcctgcagcaggtggtggatcgtaaccgcgttcgtcgcagtctgagtgcaaag
cgtcatgcgctgcagtcctggaggagcctggtggagacactgctgaccgcctgcccagct
gatctcatacctgctgatgacaggcagctcatcatcagagacctgctgctagaccttcat
gataaggtgttatctgaggatgcagcaggagaactgatgcccattgttgccggggcagtt
ttcactctgacagcccatctcagccaatcagtgctgtctgagcaacagcagggagtggga
ttagaagcatcctcaggctttgcctccatcgccaactcagctctgcatttgatcctccgc
aagctgctggacttcatcctttgtactggaggtggataccagcgtctgcgtgctcatctg
tatggctctctgctgtactatctgcaaatcgcccagaaacctgaagaaccagatactctg
cagacagctgggaaggcaatgtgggaaagactcacagcccctgaagatggtttttccaaa
ctgcagagagaaaaccttgctatcatcgagagttatggcaagtctctcatggaggttgtg
tgtagggacgcctgtgacggccatgaaataagcaggatgctggccctggcagtgctagac
cggatcctatcaatagaccgtcagaatcagtggctggtttatgtctgcaacagtggctac
ctgcggtcgctggtggagagcctgagacaggatgacgccgccctgcagagcctgctcaca
cctcagccacccctcctcaaaccactctacatctatgagagcaaaatggctctgctgact
cgtgtggctaagacgggccagggagctgtggagctgctgcgctgtggactagtggcacag
ctgatggagtgtcaggtgtttgacatggtacctgacagtgatgcacacagggtgatgagg
gacccatcaggcttcatccccagtcctatggaccgctacaggcagattcttttaccaacc
ttgagactctttcaggtgatcctgacttctaccaccatgaatcaccagcagggggcagca
caggttctccagtggctgatagtccatgcagacaccattcaggctctgttgcgctgtcat
gagctcagcatgggggctttgcaggagctctctttgcttacaggcatcatcagtaagaca
gctctgccaggtgtcctcgagatgggtggggaggtcaacagcgctgctcttatggagttc
cagggtcacatcaacagattccagcgtctgtgtctgtcactgctgagctgtctggtggga
agcgaacgggagaggttgctaaagcaggccgagatctctgcccctggtgattcagcagaa
cgacgagaggagatggaggtggccatgcaacaggtgtgtgctaacatcatggagtactgc
caaacactgctgctgcagagctcaacccaggctcagttcagcatctgcctcttcagtccc
tcaggcagtgagccagctggcagggacggaggacgcgcagatctctcatccactctgccc
tcaatggcttactcccgagcacccagcctgggtctggtcctgtacctgctgaagaacagc
gctgcagatttcttcaggttccatcagagtcacagacaaagcctgagcaaactgcagagt
ctggatcagctgcctcctgaggagctcaaggagttgtgccaaggcctggtgtcaggccca
ggaggggtggagaaaatctcatcagtccagaggagcttgctggccaagagacgactggtc
cagcttatcaacaacagagccaagctgctggccctgtgctcctatgtcattgagacatgt
ttgtttgtgttgtggcgccacctggagtattatctgttgcactgtacccccactgacccc
aaggactccctgttgcctggagccagcttatatagatcacgcctcacagatgactccttt
ggtgggttgcaggcaagtggaagccggggactcaatctgtcccgcgtcagccagcaagac
ctagacctgctgaagagcgacatggtcgcaggtttcggagaagccctgcagagaaagctg
ctggaggtggagggcttgtacagccaagtccgctcccggtacaccttcatccaggccctg
gttcgtcggatccgtggcctgctccggcagcccaaaagctga
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