Lates calcarifer (barramundi perch): 108901830
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Entry
108901830 CDS
T04895
Name
(RefSeq) probable polypeptide N-acetylgalactosaminyltransferase 8
KO
K00710
polypeptide N-acetylgalactosaminyltransferase [EC:
2.4.1.41
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00512
Mucin type O-glycan biosynthesis
lcf00514
Other types of O-glycan biosynthesis
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
108901830
00514 Other types of O-glycan biosynthesis
108901830
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108901830
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.41 polypeptide N-acetylgalactosaminyltransferase
108901830
Glycosyltransferases [BR:
lcf01003
]
O-Glycan biosynthesis
Mucin-type
108901830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Ricin_B_lectin
Glyco_transf_7C
CTK3_C
Motif
Other DBs
NCBI-GeneID:
108901830
NCBI-ProteinID:
XP_018558996
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All DBs
Position
LG10:complement(20202828..20211189)
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AA seq
639 aa
AA seq
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MRGVWLKRQVLVLLGIGLVFFLGTLFKSGYEHAPGTKELDSPAMIRSFSDLQDSISNLHN
VIRALGQKHDSMQKMLEEDRERHRRAAEVQQQPPVQQQPPVQQQPEQKEQPAPKIQEQKE
APKAKKSNKLYPNSALFKEWGENLSEDDQKEAQALFEKYGYNVFLSDRLPLDRVLPDTRD
PRCAKKSYPKDLPSLAVVLIYLDEALSVIKRALRSIIDRTPKDILKEIIMVDDNSSNENL
KGDLDAYVKMLEEQNPTLRIIRVRHNEQQGLAYARASGWRAATADVVAILDAHIEVHEMW
AEPILTQIKSDRTVVASPVFDRVNFDDLKVIQYLPAAHAFDWALWCMYEGFAPEYYKLND
SSLPGKSPSVMGILVADRKFLGEIGVLDEGMKVYGGENVELGIRVWTCGGSIEVVPCSKI
AHIERYHKPYLPDLSPAMKRNALRVAEIWMDEYKHNINLAWNLPFKNHGIDIGDITERKK
LRERLNCKPFKWYLDNVYPKLDPWDNLLAYGGMKNLDADMCIDQGPVPGHTPIAYTCYYY
GPQFSYYRQTGELYIGGIKSHKYNDNRCLTDTGTKETEPGLYNCKEAMQKGMGIYWDFTQ
GKELRNRQTKRCLEIKQGTLLIQECSGQRWQIQNIIKPF
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaggggagtgtggttaaagcggcaagtattagtcctgctggggattgggctcgtcttc
ttcttgggcacgctttttaagagcggatatgagcacgcgccagggaccaaagagctggac
tcacctgcaatgatcaggagtttttccgacctgcaggacagcatcagcaatctccacaat
gtaatccgagctcttgggcaaaagcatgattccatgcagaaaatgctggaagaagacaga
gagagacatagaagagctgcagaggtccaacagcagccaccggtccaacagcagccaccg
gtccagcagcagccagagcagaaagagcaacccgcaccaaagatccaagaacaaaaggag
gcacccaaggcaaaaaagtccaacaaactgtaccccaactctgctctgttcaaggagtgg
ggtgagaatctgtcagaggatgaccaaaaagaggcgcaggctttgtttgagaagtacgga
tacaacgtttttctcagcgatcgccttcctctagatcgagttcttccagataccagggat
ccaaggtgtgcaaaaaagagttacccaaaagacctgcccagtcttgctgtagtgctaatc
tacctggacgaagccctgtctgtcatcaaacgagccctgcgaagcatcattgaccgcacc
cctaaagacatactgaaggagataataatggtggatgacaatagctctaatgaaaacctg
aagggggaccttgacgcatatgtgaagatgcttgaggagcaaaacccaactcttcgtatt
attagagtgaggcacaatgagcagcaaggcctcgcatacgccagggcctctgggtggaga
gctgctactgctgatgtggtggccatcctggacgcacacattgaagtccatgagatgtgg
gctgaacccatactgacacagatcaagagcgacagaacagtggtggcgtcccctgtgttt
gacagagtcaacttcgatgacctcaaggtcattcaataccttccagcagcgcacgccttt
gactgggctttgtggtgcatgtatgagggttttgcacctgagtattacaagcttaacgac
agctcactgcctgggaagagtccatctgtcatgggaatcttagttgctgataggaagttt
ctaggtgaaattggagtccttgatgaaggaatgaaagtgtacggcggagaaaatgtcgag
ctgggaattcgtgtttggacatgtggaggcagtattgaagtagttccatgctccaagatc
gcccacatcgagaggtaccacaagccctacctgccggacctgagcccagccatgaagaga
aacgccctgagggtagcagaaatctggatggatgaatataaacacaacatcaacctggcc
tggaacttgccatttaagaatcatggaattgacattggggatatcactgagaggaaaaaa
ctcagagaaaggttgaactgtaaacctttcaaatggtacctggacaatgtgtatcccaag
ttggatccctgggacaacctacttgcctatggaggaatgaagaatcttgatgctgacatg
tgcatagaccaaggcccagtgccaggtcacacacccattgcctacacctgctactactat
ggacctcaattttcatattaccgccaaactggtgagctctatattggtggcatcaagtcc
cacaagtacaacgacaaccggtgtttaactgacactggcacaaaagaaaccgagcctggc
ctttacaactgcaaagaggccatgcagaaaggaatggggatatactgggatttcactcag
ggcaaagaactgaggaacagacagacaaaaagatgtcttgagattaaacagggcacactc
ctgatacaggaatgctctggccaaagatggcaaatccaaaacataatcaaacccttttaa
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