Leptothrix cholodnii: Lcho_3712
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Entry
Lcho_3712 CDS
T00681
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
lch
Leptothrix cholodnii
Pathway
lch01501
beta-Lactam resistance
lch02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Lcho_3712
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Lcho_3712
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_3712
01504 Antimicrobial resistance genes [BR:
lch01504
]
Lcho_3712
Transporters [BR:
lch02000
]
Other transporters
Pores ion channels [TC:
1
]
Lcho_3712
Antimicrobial resistance genes [BR:
lch01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Lcho_3712
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Lcho_3712
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Lcho_3712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ACB35966
UniProt:
B1Y5S0
LinkDB
All DBs
Position
complement(4151784..4153220)
Genome browser
AA seq
478 aa
AA seq
DB search
MSQPSLLTLSAALLLAGCGSLAPTYERPAAPVPTQLPLAAAEAASASAAPAAPLAWQDFV
RHPAPRRLVELALANNRDLRVAALNVERARAQLDVSLADRYPTIGVGVAANSAPNTQSGN
QAQSYTAGLQMASWELDFLGRIGNLNDAARSQLLATEAGRRSAELALVGAVLSSYLNLVA
DAQLLGVAERTLASREATFKLTRIKSDAGAASKLEEQSAVTLLAQARVARQQALRQRSQD
LATLALLLGGPVPDDAVPQPPVLDPAGDTSAPAPDDAGADAAWAALLAEVPVGLSSEVLL
RRPDVVQAEQQLQAANANIGAARAAMFPRITLTASAGQASSQFSGLFQGGNFAWTLGAQA
LMTLFDAGRNQANVNASKVGRDIAVAQYERAVQAAFKDTADALNGLATWRDQRQAQADQL
ASAREIARLTELRYGAGAASELERLDAQRSLYAAEQALVQTRLAEQQNRVGLWKALGG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaccttcactcctgacgctgtccgccgcgctgctgctggccggttgcggcagc
ctggcgcccacctacgagcgcccggccgcgccggtgccgacccagttgccgctcgcggcg
gccgaagccgcatcggccagtgcggcccccgccgcgccgctggcctggcaggacttcgtg
cgccacccggcgccgcgccggctggtcgagctggcgctggccaacaaccgcgacctgcgg
gtggctgcgctcaacgtcgaacgcgcccgcgcccagctcgatgtctcgctggccgatcgt
tatccgacgatcggcgtgggcgtcgccgccaacagcgcgcccaacacgcaatcgggcaac
caggcccagagctacaccgccgggctgcagatggcgagctgggagctcgacttcctcggc
cgcatcggcaacctgaacgacgccgcccgctcgcagctgctggccaccgaagccggccgg
cgcagcgccgagctggcgctggtgggcgcggtgctgtcgagctacctgaacctggtggcc
gatgcgcagctgctcggcgtggccgagcgcaccctggccagccgcgaagccaccttcaag
ctcacgcgcatcaagtcggatgcgggcgcggcctcgaagctggaggagcagagcgccgtc
acgctgctggcgcaggcccgcgtggcgcgccagcaggcgctgcgccagcgcagccaggac
ctcgccacgctggcgctgctgctcggcgggccggtgcccgacgacgcggtgccgcagccg
ccggtgctcgatccggccggcgacacgtctgcacctgcaccggacgacgccggcgccgac
gcggcctgggccgcgctgctggccgaggtgccggtcggtttgagctccgaggtgctgctg
cgccgtccggacgtggtgcaggccgaacagcagctgcaggccgccaacgccaacatcggc
gcggcgcgggcggcgatgttcccgcgcatcacgctgaccgccagcgccggccaggcgtcg
agccagttcagcggcctgttccagggtggcaacttcgcatggacgctcggtgcgcaggcg
ctcatgacgctgttcgacgccggccgcaaccaggccaacgtcaacgccagcaaggtcggc
cgcgacatcgcggtggcgcagtacgagcgcgcggtgcaggccgccttcaaggataccgcc
gatgcgctgaacggccttgccacctggcgcgaccagcgccaggctcaggccgatcagctc
gccagcgcgcgcgagatcgcccgcctgaccgagctgcgctacggcgccggcgcagccagc
gaactcgaacgcctggacgcccagcgcagcctgtatgccgccgagcaggcgctggtccag
acccggctggccgagcagcagaaccgggtcgggctgtggaaggcgctgggcggctga
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