KEGG   Leptospira cinconiae: AB3N61_05910
Entry
AB3N61_05910      CDS       T10766                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
lcin  Leptospira cinconiae
Pathway
lcin02024  Quorum sensing
lcin03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lcin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AB3N61_05910 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AB3N61_05910 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcin03019]
    AB3N61_05910 (hfq)
   03036 Chromosome and associated proteins [BR:lcin03036]
    AB3N61_05910 (hfq)
Messenger RNA biogenesis [BR:lcin03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     AB3N61_05910 (hfq)
Chromosome and associated proteins [BR:lcin03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    AB3N61_05910 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1
Other DBs
NCBI-ProteinID: XDD59030
LinkDB
Position
1:1299223..1299474
AA seq 83 aa
MSAKNNIQDQLLNTARKEKLELTIYLLNGVPLKGKVVSFDNFTIVLEQENKQSLVYKHAI
STIIPSKVIKLYTEEAAKEAPSA
NT seq 252 nt   +upstreamnt  +downstreamnt
atgtctgctaaaaataatatacaggaccaactactcaatacggctagaaaagaaaaactg
gaattgaccatctatcttttaaacggagttcctttaaaagggaaagtggtaagtttcgat
aattttacgatagtccttgagcaggaaaacaagcagagtttggtgtacaaacacgcgatc
tcgacgatcattccttccaaagtaatcaaactttatacagaagaagccgctaaagaagct
ccttccgcctaa

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