Leptospira cinconiae: AB3N61_05910
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Entry
AB3N61_05910 CDS
T10766
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
lcin Leptospira cinconiae
Pathway
lcin02024
Quorum sensing
lcin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB3N61_05910 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AB3N61_05910 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcin03019
]
AB3N61_05910 (hfq)
03036 Chromosome and associated proteins [BR:
lcin03036
]
AB3N61_05910 (hfq)
Messenger RNA biogenesis [BR:
lcin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AB3N61_05910 (hfq)
Chromosome and associated proteins [BR:
lcin03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
AB3N61_05910 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
XDD59030
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All DBs
Position
1:1299223..1299474
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AA seq
83 aa
AA seq
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MSAKNNIQDQLLNTARKEKLELTIYLLNGVPLKGKVVSFDNFTIVLEQENKQSLVYKHAI
STIIPSKVIKLYTEEAAKEAPSA
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctaaaaataatatacaggaccaactactcaatacggctagaaaagaaaaactg
gaattgaccatctatcttttaaacggagttcctttaaaagggaaagtggtaagtttcgat
aattttacgatagtccttgagcaggaaaacaagcagagtttggtgtacaaacacgcgatc
tcgacgatcattccttccaaagtaatcaaactttatacagaagaagccgctaaagaagct
ccttccgcctaa
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