Lichenicola cladoniae: HN018_20570
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Entry
HN018_20570 CDS
T07054
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
lck
Lichenicola cladoniae
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lck03032
]
HN018_20570
03036 Chromosome and associated proteins [BR:
lck03036
]
HN018_20570
03400 DNA repair and recombination proteins [BR:
lck03400
]
HN018_20570
DNA replication proteins [BR:
lck03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HN018_20570
Chromosome and associated proteins [BR:
lck03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HN018_20570
DNA repair and recombination proteins [BR:
lck03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HN018_20570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Ribosomal_60s
Motif
Other DBs
NCBI-ProteinID:
QKE92836
UniProt:
A0A6M8HX54
LinkDB
All DBs
Position
4532806..4533165
Genome browser
AA seq
119 aa
AA seq
DB search
MNHADLVAKVASNADLSKESASQAVEAVAKAISESLNAGEEVRYSGLGIFDISARAARQG
RNPQTGEAIAIAASKVARFRAAKSLKDTLNAGGDDKKAAKPAAAKAAPKAAAKPAPKKK
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcacgccgatctcgtggccaaggttgcctcgaacgccgacctgtccaaggaaagc
gcttcgcaggcggtggaagccgttgcaaaggccatcagcgagtcattgaacgcaggcgaa
gaggtccgctactcgggcctcggcatcttcgacatctcggctcgtgctgcccgtcaggga
cgcaacccgcagaccggcgaggccatcgccatcgccgccagcaaggttgcccgcttccgt
gccgccaagtcgctgaaggacaccctgaacgccggtggcgacgacaagaaggccgcaaag
ccggcagccgccaaggccgcgccgaaagccgcagccaagccggcccccaagaagaagtag
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