Latimeria chalumnae (coelacanth): 102347267
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Entry
102347267 CDS
T02913
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102347267 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcm03021
]
102347267 (SMARCD1)
03036 Chromosome and associated proteins [BR:
lcm03036
]
102347267 (SMARCD1)
Transcription machinery [BR:
lcm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102347267 (SMARCD1)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102347267 (SMARCD1)
PBAF complex
102347267 (SMARCD1)
GBAF(ncBAF) complex
102347267 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
102347267
NCBI-ProteinID:
XP_014345877
Ensembl:
ENSLACG00000004072
LinkDB
All DBs
Position
Un
AA seq
503 aa
AA seq
DB search
MKMAARAGFQAMNPGGGGGSAAGTLGSGGSTGPAVRMGPAPTPGQAMYRSPLPGPGYPRP
GMPGSRMTPQGPSMGPPGYGGSPSVRGAMAQSGMDQSRKRPAPQQLQPVQQQQAAQNRNH
STKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK
LRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDTALSKYDATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRL
ARLLGIHTQTRPVIIQALWQYIKTHKLQDSHEREFINCDKYLQQIFETQRMKFSEIPQRL
HALLMPPEPIIINHVIRYGVWPVYWSKLHRFPEQQFPLDTRIGYLTFHLTQIHETIETIN
QLKTQREFMLSFARDPQGFINDWLQSQCRDLKSMTDIVGNPEEERRAEFYFQPWAQEAVC
RYFYSKVQQRRQELEQALGIRNT
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggcggcgagagccggattccaggccatgaaccccggtggcggcggagggtcg
gcagcggggacgctagggtcgggcggctcgactgggcccgccgtccgcatgggcccggcc
ccgaccccgggacaggctatgtaccgctcgccgcttcctgggcccggatacccgcgccct
gggatgccaggcagccggatgacgccccagggaccgtccatgggccctcctgggtacggt
ggaagcccttcagtgcgaggagcaatggcccagtctggcatggatcagtcgcgcaagaga
cccgctccacagcaactccagccggtccagcagcagcaggccgcgcagaaccgaaatcac
agcaccaagaagaagaaaatggcagataaaattctacctcaaaggatccgagagttggtt
ccagagtctcaggcttacatggatctgctggccttcgagaggaagctggatcagaccatc
atgaggaaacggctggacattcaggaggccttgaagcgaccaataaagcaaaagaggaag
ctgcggattttcatctccaacacttttaatccagctaaatcggatgctgaggacggtgag
ggcactgtggcctcatgggagctgcgtgttgaagggcgcctcctagaggatactgcttta
tccaagtacgatgccaccaaacagaaacgcaagttctcctctttcttcaagtccctggta
attgaattggataaggatctatatggaccagacaaccatcttgtggagtggcacaggaca
gctacgacccaggagactgatggtttccaggtgaagagaccaggggatgtcaatgtgcgt
tgcactgtcttactgatgctggattaccagcctccgcagtttaagctggaccctcgcctg
gcccgtttgctgggaatccacacccagacccggcccgtgatcatccaggcactttggcag
tacatcaaaacccacaaactacaggattcccacgaaagagagtttatcaactgtgacaaa
tacctccagcagatttttgagactcagcgaatgaagttctctgaaattccccaaaggctg
catgctttgttgatgcctcctgagccaatcattatcaaccatgtcatcaggtacggtgta
tggcctgtgtactggagcaaattgcacagatttccagaacaacagttcccattagatacc
agaatcggatatctgacgttccatttgacacagatccacgagacaatagagaccatcaac
cagctgaagacccagcgagagttcatgctgagttttgctcgagacccgcagggtttcatc
aatgactggctccagtcacagtgccgggatctaaagtccatgactgacatagttgggaat
ccggaagaggaacgccgtgctgagttttacttccagccatgggctcaggaggctgtctgc
agatacttctactccaaggtgcagcagagacgtcaggagctggagcaggccttgggcatc
cgaaacacataa
DBGET
integrated database retrieval system
