Latimeria chalumnae (coelacanth): 102349377
Help
Entry
102349377 CDS
T02913
Symbol
RAPGEF2
Name
(RefSeq) Rap guanine nucleotide exchange factor 2
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04010
MAPK signaling pathway
lcm04517
IgSF CAM signaling
lcm04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102349377 (RAPGEF2)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102349377 (RAPGEF2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102349377 (RAPGEF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
RA
PDZ_6
RA_2
cNMP_binding
PDZ_2
Motif
Other DBs
NCBI-GeneID:
102349377
NCBI-ProteinID:
XP_006000737
Ensembl:
ENSLACG00000009378
LinkDB
All DBs
Position
Un
AA seq
1507 aa
AA seq
DB search
MKLSMSDNFHLFFSSSWHSFHFGSQECTKLQLPADFTKLHLTDSLHPQVTHVSSSHSGCS
ITSDSGSSSLSDIYQATESEAGDMDLSGLPETAVDSEDDDDEEDIERASDPLMSRDVVRD
CLEKDPIDRTDDDIEQLLEFMHQLPAFANMTMSVRKELCAVMVFAVVERAGTIVLNDGEE
LDSWSVILNGSVEVTYPDGRTEILCMGNSFGVSPTMEKEYMKGVMKTKVDDCQFVCIAQQ
DYCRILNQVEKNMQKVEEEGEIVMVKEHRELDRTGTRKGHIVIKGTPERLTMHLVEEHSV
VDPTFIEDFLLTYRTFLSSPMEVGKKLLEWFNDPSLRDKVTRVVLLWVNNHFNDFEGDTA
MTRFLEEFENSLEREKMMGHLRLLNIACAAKAKRRLITLTKPSREAPLPFILLGGSEKGL
GIFVDSVESGSKAAETGLKRGDRILEVNGQNFENVQLSKAMEILKNNTHLSITVKTNLFE
FKQLLTRLAEEKRNGAPHLPKIGDIKKASRYSIPDLAVDVEQVMGLEKVNKKSKANTVGG
KNKLKKIFDKTRISILPQKPYNDIGIGQSQDDSIVGLRQSKHIPPTLPVSGNLSSSNPDL
LQSHHRILDFNNSPDLPDQVLRVFKADQQSRYIMISKDTTAKEVVHQALREFALTGPENY
SLCEVSVTPEGVIKQKRLPDQLSKLADKIQLSGRYYLKNNMETETLCSDEDAQELLKESQ
ISLLQLSTIEVATQLSMRNFELFRNIEATEYIDDLFKLKTKVGSSNLKKFEEVINQETFW
VASEILKELNQIKRMKIIKHFIKIALHCRECKNFNSMFAIISGLNLAPVARLRSTWEKLN
SKYEKLFQDLQDLFDPSRNMAKYRNVLNSQNLQPPIIPLFPVIKKDLTFLHEGNDSKVEG
LVNFEKLRMIAKEIRHVGRMASVNMDPALMFRTRKKKWRSLGSLSQGSTNAALDVVQTGG
HKKRVRRSSFLNAKKLYEDAQMARKVKQYLANLVLEMDEDSLQVLSLVCEPSTNTLPKNA
GDRRSGKCDTSPVTPRAGTQQPKTQQPQPQQQQPQQQQQKGNQALQVPPVSLYPSRKKVP
VKDLPPFGTSSPQALRKILSLSEEANFDRHKKQAEDTISNASSQLSSPPTSPQTSPRKGY
TLAPSGTVDNFSDSGHSEISSRSSIVSNSSFDCVPMHDEKRQRHSVSIVEANLGVGRIDR
RAVMDPDQYSFSSYSPVPENRSLYAGATVLSSPSTEELTQDQGDRASLDAADSGRGSWTS
CSSGSHDNIQTIQHQRSWETLAFGHTHFDSAAEGAALWASGNHMDQLMFSELANKCSRYS
QARENLDQAQSRGSWASSPGYWGEETEGDTGTIKRRGGKDVAAEAETSSITSLTSEESKN
IRPSHITVSSSTAKGLIARKEGRYREPPPTPPGYIGIPIADFPEVSSFQTRKPPDYNVAL
QRSRFVARPCEPLGASATQQLHGHPAARTVNKPQWHRPNESDPRLALYQSQGFSAEEEDE
DEQVSAV
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaagcatgtctgataactttcatcttttcttttcttcctcatggcattcattt
catttcggctcacaggaatgcactaaacttcagcttcctgcagacttcactaagctgcac
ctcacagatagccttcatccacaggtgacccatgtgtcctcgagtcattcaggatgtagc
atcaccagcgactctgggagcagcagtctttctgatatttaccaggccacagaaagtgag
gcaggtgatatggaccttagcggcctgcctgagacagcagtggactctgaagatgacgat
gatgaggaagacattgagagagcgtcagatcctttgatgagcagggatgttgttagagac
tgcctggaaaaggacccaatagacaggacagatgacgatattgaacaactattggagttc
atgcatcaactgcctgcatttgcaaacatgacaatgtcggtgaggaaagagttgtgtgct
gtgatggtgtttgcagtggtagaacgggctggtacaatagtgctgaatgatggagaagag
ctggactcctggtcagtgattttaaacgggtcagtggaggtaacatatcctgatggaagg
acagagatactgtgtatgggaaacagctttggtgtctctcctaccatggagaaggaatac
atgaagggagtaatgaaaaccaaagtggatgactgtcagtttgtgtgtatagcccagcaa
gactactgtcgaatcctcaatcaggtagagaagaatatgcaaaaagtggaggaagaggga
gagatagtgatggtgaaagaacatcgagagctggatcggacggggaccaggaaaggacac
attgtcattaagggaacaccagaaaggttaacgatgcacttggtagaagagcactctgtt
gtggaccccacatttatagaagacttcttgttgacatataggacctttctgtctagccca
atggaagtagggaagaagttgttggagtggtttaatgaccctagcctcagggacaaggtt
acacgggtagtactgctgtgggtaaacaatcacttcaatgactttgaaggagacactgct
atgactcgcttcctggaggaattcgagaacagcttggagagagagaaaatgatgggccac
ctgagactgttaaatattgcgtgtgctgctaaagctaaacgaagacttataacactaaca
aagccatcacgggaagcccctttgcctttcattctgctcggagggtcagagaagggactg
ggaatttttgttgacagcgtggagtctggtagcaaagctgctgaaactgggcttaagagg
ggtgaccggatactggaagtaaatggacaaaactttgagaatgttcagctttctaaagcc
atggaaattctaaagaacaatacccatctgtctatcactgtgaaaacaaacttgttcgaa
tttaaacaattactaaccaggttggcagaagaaaagcggaatggtgctccccatttgcct
aaaattggtgacattaagaaagccagccggtactccattccagatcttgcagtggatgtg
gagcaggtgatgggattagagaaagtgaacaaaaaaagtaaagccaatactgttggggga
aagaataaattgaagaaaatatttgacaagactcgaatcagtatcctgcctcagaagcca
tacaatgatattggaattggccagtctcaggatgacagcattgtaggactgaggcagtct
aaacacattcctcccaccttgcctgtgagcgggaacctgtcgtccagtaatcctgatcta
ctgcagtctcatcaccgaatcctggattttaacaactctccagatttacctgaccaagtt
ctaagggttttcaaagctgaccaacaaagtcgctacattatgatcagtaaagacacaaca
gcaaaggaggttgtgcatcaagcgcttcgtgagtttgctctgactggacctgaaaactat
tcactgtgtgaagtctctgtgacgccagaaggggtcatcaaacaaaaaaggcttccagat
cagctgtcaaagcttgcagataaaatacagttgagtggcaggtattaccttaagaacaat
atggagacggagacattgtgttcagatgaagatgctcaggagctgctgaaggaaagccag
atctccttactgcagctcagcaccattgaggttgccacccagctttccatgagaaatttt
gagctgttccgcaacattgaggccacagagtacattgatgacctgtttaaactgaagaca
aaagtgggctcttctaatctgaagaagtttgaggaggtgatcaaccaggaaacgttctgg
gtcgcctctgagatcctgaaagaactcaaccagataaagagaatgaaaatcatcaagcat
ttcatcaagattgcactacactgccgagagtgcaagaacttcaactctatgtttgcaatt
atcagtgggttgaacctggcaccagtggcgaggctacgtagtacatgggaaaagctaaat
agcaaatatgagaaactgttccaggatctccaagatctgtttgatccatccagaaatatg
gcaaaataccgcaatgtcctcaacagccaaaacctgcagcctcctattattcctctcttc
cctgttatcaagaaggatctcacattcctgcatgaaggcaatgactccaaagtagaaggt
ttagtaaactttgagaagctaagaatgattgcaaaggaaattcgtcatgttggccgaatg
gcttctgttaacatggaccctgctctgatgttcaggactaggaagaagaaatggaggagc
cttgggtcacttagccaaggcagcacgaatgcagcgctagatgtagtacagacgggagga
cataaaaaacgggttcgccgcagttctttcctcaatgccaagaagctatacgaagatgct
cagatggctcgcaaagtaaagcagtatcttgctaacttggtgcttgagatggatgaagac
agcctccaggtcctgtcactagtgtgcgagccatccacaaacacattgcctaagaatgca
ggagacagaaggtccgggaaatgcgacacatcaccggtaactcccagggcaggaactcaa
cagccaaaaacccagcaaccgcagccacaacagcagcaaccccaacaacaacaacagaaa
ggaaaccaagcgctccaagttccgccagtatctctctatccttcacgcaagaaagtgccg
gtcaaggaccttccgccattcggcacaagttcacctcaagctctgaggaaaattctgtcg
ctgtctgaagaggcaaactttgaccgacacaaaaaacaggcagaggataccatctcaaat
gcatcttcacagctttcttctccaccaacgtcacctcagacttctccaaggaaaggttat
actttggctcccagtggaactgttgataacttttctgactctggtcacagtgaaatctct
tcccgatccagtatcgtcagcaattcctcatttgattgtgttcccatgcatgatgaaaag
aggcagagacattctgttagcatcgtcgaggcaaatctaggagttggaaggattgacaga
agagctgtgatggatccagatcaatatagctttagctcctactcaccagtgccagagaac
agaagcctatatgctggggcaacagtactctcttcccccagcacggaagagttgactcaa
gaccaaggggacagagcttcacttgatgcagcagacagtggccgaggaagctggacttct
tgctcaagtggctcccatgacaacattcaaacaatacagcaccagaggagctgggagacg
cttgcatttggacacactcactttgacagcgcagctgaaggggcagcgttgtgggcctcg
ggcaaccacatggaccagctcatgttctctgaacttgccaataaatgtagccgatacagc
caggctagagagaaccttgatcaagcccaatcccggggtagctgggcatcctccccaggc
tactggggagaggagacagaaggtgacacaggcaccataaagcgaaggggtggcaaggat
gtcgcagccgaagctgaaaccagcagcattacgtcactgacttcagaagagtcaaaaaat
attaggccttctcatattactgtgtcatcgagcacagcaaaggggcttattgcacgaaaa
gagggccgatatcgagaacctcctccaactccccccggatacataggaattcccattgct
gacttcccggaggtctcctctttccagaccagaaaaccccctgattacaatgtagctctg
cagaggtctcggtttgtggcacgtccttgtgagcctcttggagcttcagctacacagcag
ctgcatggtcaccctgcagccaggactgttaacaaacctcagtggcacagaccaaatgag
tccgacccacggctagctctctaccagtcccaaggcttctcagctgaggaagaggatgaa
gatgaacaagtctctgcagtctaa
DBGET
integrated database retrieval system
