Latimeria chalumnae (coelacanth): 102350221
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Entry
102350221 CDS
T02913
Symbol
SRSF1
Name
(RefSeq) serine and arginine rich splicing factor 1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03040
Spliceosome
lcm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102350221 (SRSF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102350221 (SRSF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcm03041
]
102350221 (SRSF1)
Spliceosome [BR:
lcm03041
]
Common components
Common spliceosomal components
SR proteins
102350221 (SRSF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
102350221
NCBI-ProteinID:
XP_005987513
Ensembl:
ENSLACG00000014160
LinkDB
All DBs
Position
Un
AA seq
209 aa
AA seq
DB search
MSCNQGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAF
VEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGASQRARFGPPSRRS
EYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMNYAVRKLDNTK
FRSHEVWIGEGSLDPNPWSWIIGFKSIGG
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcaaccagggcggcgttatccggggcccggccggcaacaacgattgccgcatc
tacgtggggaaccttccccccgacatccgcaccaaggacatcgaagacgtgttttacaaa
tacggcgccatccgcgacatcgacctgaagaaccgccgaggggggccgcctttcgccttc
gtcgagttcgaggatccacgagatgcagaagatgctgtttatggacgagatggctacgat
tatgatggctaccgtttgcgagttgaatttccaagaagtggtagaggcactggaagggga
ggaggtggtggtggtggtgcaagccagagagctagattcggacccccatccaggcgctct
gagtacagagtgattgtttcaggacttcctccaagtggaagctggcaagatttaaaggat
cacatgcgtgaagcaggtgatgtatgttatgcagatgttttccgggatgggactggtgtc
gtggagtttgttcgcaaagaagatatgaactacgcagttcgaaaactggataacactaaa
tttagatctcatgaggtttggattggagagggctcactggatcccaatccttggagctgg
atcattggattcaaatcaataggaggatag
DBGET
integrated database retrieval system
