KEGG   Latimeria chalumnae (coelacanth): 102352808
Entry
102352808         CDS       T02913                                 
Symbol
TEX10
Name
(RefSeq) testis expressed 10
  KO
K14827  pre-rRNA-processing protein IPI1
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    102352808 (TEX10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lcm03009]
    102352808 (TEX10)
Ribosome biogenesis [BR:lcm03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    102352808 (TEX10)
SSDB
Motif
Pfam: TPR_TEX10 Ipi1_N HEAT_MROH2B_C HEAT_GCN1 DOP1_C HEAT_EF3_N Vac14_Fab1_bd TOR1L1_N UME MMS19_N TPR_CAND1 HEAT_GCN1_C Cohesin_HEAT HEAT TPR_IPO5 HEAT_2 HEAT_EZ RTP1_C1
Other DBs
NCBI-GeneID: 102352808
NCBI-ProteinID: XP_006010458
Ensembl: ENSLACG00000003698
UniProt: H3A3D8
LinkDB
Position
Un
AA seq 930 aa
MTRKRKRQGDFQKVKLKIGKKKPRTDNATCTNFKTKGIHLPDQLKEDGILPTNNRKLNVK
DLLAQMHHYNAGVKQNALIGLKELLSQHDSVLDSHLSSILSEVAAVFTDKDASVRAAAIR
LLYFLAPRLSSERIAPFFPLVSAHLSSAMTHIVEGIQEDALKVLDVLLENYPGLLTDRSN
VLLKNFVELISHQKLSKGLKSGGKASAWMLSVSPNRRLTSQQWRLNVLSRLRKFLQALVR
DSKATEESGKLFEGAGKTGTSLVAALEVRWENLASGLQTIQLYENSGSQPCVLSPFRLRP
LVGVGAGVEDDACSVENVKVLIQTLVPLLIECWVEASPVQLIAPVAGNLLEPEAVLLMQQ
VLSIIQLLWRLLQDREGVQKTDTWLRTTYLDDFNHHFMLHFPYSVIETIRQKKKQMSKSD
KRAALQLSSIDPLALNLTLCQVMVSLTSTPTLQLDIDWIQQIQKFVIENLSAGNKLTSKQ
LSGMLAVVWRLVLLPRNRASTEQLLRAVYLQYQQKGLILPVRTMLIKFFSGLYLQEKESN
PHIARSRVLSRWLAGLPLQLIHLGARNYVLSAQLLDTIHAAAARSNKELLQSLQVNACRL
YNPQDGTLVLLPPESQQQLVQLLYFLPSISLELLSCLSHCCTMGRLSSNLAANLIRIIHI
RSSFMGWTCSVQDSPLSDTGYFNFLFSVLTGFSREELSWLQNGSGNPHISQTQLSPVRLY
LTDLDQFVHHWAVTKVVCHCLSAVPSRSQCFDILQSAIVRHLAGLTVIPDSTVGSVLFVL
SKLLEPTCVISDFSLKFLARCCYSLLHSSLTMEKPNAGHMQKRELLWGACLSALANLPRL
LKVLLQSLRVPEACQEELPIIAQVLRLLLQHIPLRSHIIANALLLQQIVQEITSCKSGEV
REQWLTDLHYSFSIYFAAQTRGASTINTSF
NT seq 2793 nt   +upstreamnt  +downstreamnt
atgaccaggaaaagaaagcggcagggagactttcagaaagtgaagctgaaaattggcaag
aagaaacccagaactgacaatgcgacctgcaccaacttcaaaacaaagggcatccacctt
ccagatcagttaaaagaggatggaatacttccaacaaacaacagaaagcttaatgtaaag
gatcttcttgcccagatgcaccattataatgcaggggtcaaacagaatgcattgattgga
ctgaaggagcttctatcccagcatgattcagtcctggattctcacctgtccagtattctc
agtgaggtggcagctgtcttcacagataaggatgccagtgtaagggcagcagccattcgc
ctgctctacttccttgcccccaggctttcctcggaaagaatcgctcccttcttccccttg
gtgagtgcccacctgtccagcgccatgacacacatcgtggaagggattcaggaggatgcc
ttaaaagttcttgacgttttgttagagaactacccggggctgctcacggaccgcagcaac
gtcctgctcaagaactttgtggagctcatctcccatcagaagctgtcgaagggcctgaag
agtgggggcaaggcttctgcatggatgctgtctgtcagcccaaaccgaaggcttacctct
cagcagtggaggctgaacgtgctgagcaggctgaggaagttcctgcaagcacttgtcagg
gattcaaaggcaaccgaagaaagcggaaagctgtttgagggagcaggaaagactgggacc
agcttggtggctgcactggaagtgaggtgggagaaccttgcgagtggattgcagactatc
cagttgtatgagaactccgggtcccagccttgtgttctgtcaccgttcaggctgaggcca
ttagtcggtgtcggtgctggtgtggaagacgacgcgtgctcggtggagaatgtgaaggtc
cttatccagacgctggtccccttgctgatcgagtgctgggtggaggcatctccagtgcag
cttattgctcccgtggctggaaacctgctggagccagaagccgtgctgctaatgcagcaa
gttctcagcatcatccagctactgtggaggctgttgcaagacagggagggggtgcaaaaa
acggatacctggctacgaacaacttatcttgatgactttaaccatcattttatgctgcat
tttccttactctgtaattgaaaccataaggcagaaaaagaaacagatgagtaaaagtgac
aagagagctgcactccagttaagtagtatagacccactggcactgaatttaactttgtgt
caggtcatggtctctctgactagcaccccgacactgcagctcgatatagactggatacaa
cagattcagaagtttgtcatcgagaacctgtccgctggaaacaagctcacttcgaagcag
ctgagtgggatgctggcggtggtgtggaggcttgtgcttctgccacgtaaccgggcatcc
acagagcaattgctgagagcagtttacctgcagtaccagcagaaggggcttattctccct
gtccgtacgatgctgataaaattcttcagtggcctttacctacaagaaaaggagtccaac
cctcacattgcaaggagtcgagtgctgtctcgctggctggcaggacttcctttgcagctg
attcatcttggggccaggaactatgtgctgtcggctcagcttcttgatacgattcatgct
gcggccgctcgttcgaacaaggagctgctccagagtttgcaagtcaacgcctgtagactt
tataatccacaggatggcactctggttcttcttccacctgaatcccagcagcagttagtg
cagctgttgtattttctgcccagtatctcattggagttgctttcctgcttaagccactgc
tgcactatggggcgattgtcctctaaccttgccgccaacctcatcaggataattcacatc
agatcctcgttcatgggatggacgtgctctgtgcaggacagtcccctgagtgacacaggc
tactttaatttcctgttttctgtcttgacaggattctcgagggaggagctgtcctggctc
caaaatggcagtggcaaccctcacatcagccagacacagctctcacctgtccgcctgtac
ctgactgatctggaccagtttgtacaccactgggctgtgactaaggtggtgtgccattgc
ttgtcagcagtaccttcacgaagtcagtgctttgacatccttcaaagtgccattgtcaga
catctggctggtttgactgtgattcccgacagtacggttggatcggttctgtttgtcctg
agtaaactacttgagccaacctgtgtcatcagtgacttttcactaaagtttctggctagg
tgctgctacagcctgcttcattcttcattgacaatggagaaacccaacgctggacacatg
cagaagagggagctgctttggggagcatgcctttcagccttggccaacctccctcgtctg
ctcaaagtgcttctgcagagcctgcgagtgcctgaagcctgccaagaggagctgcccatc
atcgctcaggtccttcggctcctgctccagcatataccgctcaggagccatataattgca
aacgcactgctgcttcaacagattgtccaggagatcacgagctgtaaaagtggcgaagtc
cgagagcagtggctgacagatcttcattacagctttagcatctactttgcagcgcagacc
agaggagccagcactatcaacacgtctttttga

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