Latimeria chalumnae (coelacanth): 102354661
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Entry
102354661 CDS
T02913
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat domain 37
KO
K12600
superkiller protein 3
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102354661 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102354661 (TTC37)
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
102354661 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_19
TPR_12
TPR_14
TPR_16
TPR_8
TPR_17
TPR_CcmH_CycH
TPR_9
ANAPC3
TPR_6
ARM_TT21_N
TPR_30
ARM_TT21_C
BTAD
Fis1_TPR_C
ARM_TT21_2nd
TPR_20
ClpB_D2-small
FlbT
Motif
Other DBs
NCBI-GeneID:
102354661
NCBI-ProteinID:
XP_005990057
Ensembl:
ENSLACG00000009815
UniProt:
H3AND2
LinkDB
All DBs
Position
Un
AA seq
1569 aa
AA seq
DB search
MSNKEVKAGLKSAREAIRNKEYKEALKHCKNVLKIEKNNYNAWVFIGVAAAELDQPDQAQ
TAYRKAADLEPDQLLAWQGLASLYEKNSQSDFKQELPGVYQRLLELYESTDKQKWSEICK
KLADVYHEDGKHLELARIWHKLIAVKREEGIENEELHQLWRRMIQLLANGAGAHDNETQQ
LLISAFENALRSMDKIPSDDHQKLYKDFINFLSELPYEEVKLKRACENMADLYPAAAFPL
HVLSMHFIQSESFSEEAVQCYSRLLGMDSESGSGLIGLGIKALKDKKYEEASQNLIQGLK
HASSCVTGWYNLALAQLKMHKYEKSNSSCKQALKLLSAPKSISDYGTQQKNEVLRLSVEA
LVKAGRSDWSKEAISTLEQFSDASNDPALLALKGQAYLHTGLVDQASQIASDLAVSHPDL
AEAYALSGLFHYSQKNYAQAEKNFQRAIERKADVAEYYYYLGLVYWFMSEETRKDKAKTL
THFIKAAKLDAYMGKAFCYLGHFYRDVAEDKGRARGCYRKAFELDESDGDAGAAVVDLSM
ELGDTDTALTILKKVTNRASAGTAKWAWLRQGLYYLRMNQHTQAVADLQAAIRADPQDPN
CWESLGEAYLSRGGYTTALKSFTKASELNPQSIYSMYKIAAIKQMLGKYKEAVADYQLIV
QMSEDYVPALKGLGECYLMLARSALNNYLDGRAVDCVEQALEFFTRAIQHRADASCLWKL
LGDACTTLQCVSPSKVNVRVSGLLLSHNESSQKQALNQTALLALGGRCYGRALQLMPVSA
NLWCDIGINYYRQAQNFAAKGHGGDAKELLEKSLQCLKKSVMLDSGSHLYWNALGVVASC
KGIENYALAQHAFIKSFEVEQNNVVAWTNLGALYLKNENVELAHEAFKVAQSLEPSYVMC
WIGQALIAEAVGSYEAMDLFRHTTELSMHTEGAKGYAHWVCATLQDKTNRNSELYCYNIV
QMNAVPAAQVVLSKYTERIQSDAAAFTMLGYLNEYLSLKGLAKDAYQRTLVLVKNAEDHE
KLNSALRNSARSLCAAGQYEKAIQAYMSTPRTEFDDLTGLALAYFKKGLLKESTKAYEKA
LPVAASDEEKAHVLTALALIEYKQNKIDSAKTLLFKCSMLKEPKIESLQALCALGLAKGD
ATLSSAALNELLKHVTIEDHTYERCLLTSAVFALQGKNMAAQRQIAKAVHSNPGNTGLWT
LLSKLVPHFTPRCANGGAVAGTVAQTLNLNRAKQSLLYIGMNQLAAGRHLAEDENNNALK
TIQRAAHLCPDNPATWAALMAACHTENTVSCLNRSKPRRIALEKSFVSMVSAQAERNKKL
PSSYTESLEKWSLWQAVTGLRQAGNASEAEALCTKALSSHPDQPMTFLLLRQVQCEQLLH
THKQLPRTVLDELKKAVVSNFTSVTAWHWLAEVYKSQGLMVAAEMCYRQSLQVASQQSSV
NGKLSSLLQLALLALTLCTAKIADPHWSSLVQEATNEALKISFSSVALLLQALLQFSVKM
GARETRRLLERVVYQPGHAETVRSVARWYLLQHLHAKNDVELIDVLFENAKASGDVRVEE
LYEQLSSSQ
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgtccaataaagaggtgaaggcgggcttgaaaagtgcaagagaagctataagaaacaaa
gaatacaaagaggccttgaaacactgtaagaatgtgctgaaaatcgagaagaataactac
aatgcctgggtttttattggtgtggctgcagcagaactggaccagcctgaccaagcacag
actgcatacagaaaggctgctgatctggagccagaccagctcctggcatggcaggggctg
gcaagtctatacgagaagaactcccagtcagatttcaaacaggagttgcctggagtttac
cagagactcttagagctgtatgaaagtactgacaagcagaaatggagtgaaatttgcaag
aagttagcagatgtgtaccatgaagatgggaaacacctggagcttgctcgaatatggcat
aaattgatagcagtgaaaagagaagaagggattgaaaatgaagagcttcaccagttgtgg
aggagaatgattcagttattggcaaatggggcaggtgctcacgacaatgagactcagcaa
ctgttaatatcagcatttgaaaatgccttaaggtctatggataaaatccccagtgatgac
caccaaaagctttataaggattttattaattttttatctgagttaccatatgaagaagtc
aagttgaaaagggcttgtgagaatatggctgatctttatccagctgctgcttttccactg
catgtccttagcatgcactttattcagtcagaatctttcagtgaagaagctgtgcagtgt
tattcgagacttcttggaatggattcagaaagtggttcaggtctcattggcttgggaatc
aaggccttaaaggataagaaatatgaagaagcttcacagaatctgattcagggattaaag
catgcaagttcctgtgtaacaggttggtataacctggctctagcacagttgaaaatgcac
aagtatgagaaatcaaatagttcttgtaaacaagctctgaaattactgtcggcaccaaaa
agtatctctgattatgggactcaacagaagaatgaagttcttcgtttaagtgtggaagct
cttgtcaaagctggtcggtctgactggtccaaggaagccattagcacattggagcagttt
tcagatgccagtaatgatcctgcactgcttgcacttaagggccaggcttatttgcacaca
ggtcttgtcgatcaagcttcccagattgcatcggaccttgcagtctctcaccctgacctg
gcagaggcatatgcattaagtggactatttcactacagtcaaaaaaattacgcacaagca
gagaaaaattttcagagagcgattgaaagaaaagctgatgtagcagagtattactactac
cttggcctggtttactggtttatgagtgaagagacgaggaaggacaaggccaaaacgctt
actcatttcataaaggctgcaaaattggatgcatacatggggaaggctttctgctatctg
ggccacttctacagagatgtagctgaggataagggaagagctcgtggttgttatagaaaa
gcctttgaactggatgaaagtgatggagacgctggagcagcagttgtagacttaagcatg
gagctgggagacacggacactgctcttacaattctgaaaaaagtaaccaacagagcaagt
gctgggacagcaaagtgggcctggctgcgacaggggctttactacctgagaatgaatcaa
cacacgcaagcagtagctgatttgcaagctgccataagggctgacccacaggatcctaac
tgctgggagagtttgggagaggcatatttgagcagaggaggttacactactgcactgaaa
tcttttaccaaggccagtgagctgaatccccagtctatctacagtatgtacaagatagca
gctataaagcagatgctgggcaagtacaaagaagcagtggcagactaccaactgatcgta
caaatgtcggaggattatgtccctgctcttaaagggcttggtgagtgctatctcatgcta
gcaagaagtgcacttaataactatctagatggaagagctgtggactgtgtggaacaagca
cttgagttcttcacacgagccattcaacatcgagcagatgcctcttgcctgtggaaactg
cttggagatgcttgtaccactttgcagtgtgtgtccccatctaaagtgaatgtcagggtt
tctggtcttctcctcagccataatgaatccagtcagaaacaagctctgaatcaaactgca
ctccttgctcttggtggaaggtgctatggcagagcacttcaactcatgccggtatctgct
aatctgtggtgtgacattggaattaactactaccgtcaggcacaaaacttcgctgctaaa
gggcatggaggtgacgccaaggagctgctggaaaagtctttacagtgtcttaaaaaatca
gtgatgctcgacagtggaagccacctgtactggaatgcacttggagtggttgctagttgc
aaaggaattgagaattatgctcttgcacagcatgcttttatcaagtcattcgaggtggaa
cagaataacgttgtcgcttggaccaacttaggagctctttacctgaaaaatgaaaacgtt
gagctggctcatgaagccttcaaggtagcccagtcccttgagccatcatacgtcatgtgc
tggattggacaggcacttattgcagaggctgttggcagttatgaagccatggatcttttc
aggcacaccacagagcttagtatgcatacggaaggagctaagggctatgcccactgggta
tgcgcaacactgcaagataaaaccaacagaaattctgagctgtactgctacaatattgtg
cagatgaatgcagttccagcagctcaagttgttttaagcaaatatacagaaagaattcag
tctgatgctgcagcttttacaatgctgggctacttaaatgagtatctgagtttgaagggg
ctggcaaaagatgcatatcaaaggacactggtgttggtgaaaaatgctgaagatcatgaa
aaactaaactctgcattaaggaactctgccagatctttatgtgccgcaggtcaatatgag
aaggccatccaggcttacatgtcaaccccacgcacagagtttgatgacctcactgggctt
gcgctggcttacttcaagaaggggctcttaaaagagagcaccaaggcctatgagaaagct
ttacctgttgctgcttcagatgaggagaaagcccacgtcttgaccgctcttgctctgata
gagtataagcagaacaaaattgacagtgccaagacattattgtttaaatgttctatgttg
aaagaacctaagattgaaagtttacaggctctttgtgctctggggctggcaaagggtgat
gctaccctgtcatcagcagcactgaatgaactgctcaaacatgtgaccattgaagaccac
acttacgagcggtgtcttcttacctctgctgtatttgcactacaagggaagaacatggct
gcacaaagacaaatagctaaagctgttcatagtaatccagggaacactggcctctggacc
ctcttgtccaaactggttcctcactttactccacggtgtgcaaacggtggagctgttgct
gggactgttgctcaaactcttaatctcaaccgtgcaaagcaatccctattgtacattggt
atgaatcaactagcagcaggcaggcatttggctgaggatgaaaacaataatgcattaaaa
actatccagagagcagctcatctttgtccagataatccggccacgtgggctgctttaatg
gccgcctgtcacacagaaaatacggtgtcttgtctgaaccgctcaaagcccaggagaata
gctttagagaaatcatttgtgagcatggtctctgctcaagctgaaagaaacaagaagctt
ccatctagttacactgagtcacttgaaaagtggtccctctggcaagctgttactgggttg
aggcaagcaggtaatgccagtgaggctgaagccctctgcacaaaggccttgagtagtcat
cctgaccaacccatgacattcctgttgctaagacaggttcagtgtgagcagcttctccac
acacacaaacaactgcctagaacagtccttgatgaactgaaaaaggcagttgtgtcaaac
ttcacttcagtaactgcgtggcattggctggcagaagtgtacaagtcccaaggattaatg
gtggctgcagagatgtgttacagacagagcctgcaggtggcatcacagcagagcagtgtg
aatggaaagctgtcaagtttgctccagttggcactgcttgcccttacgctttgcacggca
aagattgcagatcctcactggtcatcactagttcaagaggccacaaacgaagcactgaag
atctccttcagttctgtggccctcctgcttcaagcgctgctgcagttcagtgtcaaaatg
ggggcgagggagacacggcgactgctggagagggtggtataccagccaggacatgcagaa
accgtcagatcagtggcacgctggtacctcctgcaacacttgcatgccaaaaatgacgtg
gagcttatagatgtgttgtttgaaaatgccaaagcaagtggagatgttcgagttgaagaa
ttgtatgagcaactatcgtcatcgcaatag
DBGET
integrated database retrieval system
