Latimeria chalumnae (coelacanth): 102357918
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Entry
102357918 CDS
T02913
Symbol
ABCD4
Name
(RefSeq) ATP binding cassette subfamily D member 4
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm02010
ABC transporters
lcm04146
Peroxisome
lcm04977
Vitamin digestion and absorption
lcm04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102357918 (ABCD4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
102357918 (ABCD4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
102357918 (ABCD4)
04980 Cobalamin transport and metabolism
102357918 (ABCD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102357918 (ABCD4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcm02000
]
102357918 (ABCD4)
Enzymes [BR:
lcm01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
102357918 (ABCD4)
Membrane trafficking [BR:
lcm04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
102357918 (ABCD4)
Transporters [BR:
lcm02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
102357918 (ABCD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
ArsP_1
AAA_30
AAA_16
FtsK_SpoIIIE
DEAD
AAA_7
AAA_22
PduV-EutP
nSTAND6
RsgA_GTPase
DLIC
AAA_29
AAA_19
Motif
Other DBs
NCBI-GeneID:
102357918
NCBI-ProteinID:
XP_005986692
Ensembl:
ENSLACG00000018527
LinkDB
All DBs
Position
Un
AA seq
446 aa
AA seq
DB search
MASKLLISPFTLAYYTYQCFCSTGWLGPVSIFAYFVIGTIVNKILMGPIVSTLVQQEKLE
GDFRFKHMQVRVNAESAAFYRAGKVEHMRTNRRLQSLLQKQRELMNKELWLYIGINTFDY
LGSILSYIVIAIPIFSGIYDSLTPAELSALVSKNAFVSIYLISCFSQLIDLSTTVSDVAG
YTHRIGELQEVLLQLSRKQVDGDWTADDSWDFDSVPGEQAVPVDTAFILERVSFSPPGSE
EPLVKDLNLKITQGSNLMIMGNTGTGKTSLLRVLNGLWESTQGCVRMVSCFGPHGVLFLP
QKPFFTDGTLREQVIYPLKEIYPVTGAVDDERILRFLRMAGLLSLLKRTGGLDTKVDWNW
YDVLSPGEMQRLSFVRLFYLQPKYAVLDEATSALTEEAEVDLYRTCKQLGMTVISVGHRS
SLEKFHDFILKLCGDGKWEVVKIKQE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggccagtaaactcctcatttcaccgtttacactggcttattacacttaccagtgtttc
tgcagcacaggttggttgggtccagtcagtatctttgcatacttcgttattgggaccatt
gttaacaaaatcctgatggggcccatcgtgtcaaccctcgtccagcaggagaaactggag
ggcgactttagatttaaacacatgcaggttcgagtgaatgcagagtctgcagccttttac
agagcaggtaaggtggagcacatgagaactaacagaagactgcagagcctcttacagaag
cagagggaactaatgaacaaggagctctggctttacattgggataaacacgtttgattat
ttgggcagtatcttgagttacattgtcatcgctattcccatattcagtggcatatatgac
agcctaactcctgcagagctcagcgcccttgtcagcaagaatgcttttgtctcgatctac
ctgatcagctgcttcagtcagcttattgacctctccacaacggtgtcggatgtagcaggc
tacacacacaggattggtgagctacaggaggtccttctgcagctttccaggaagcaggtt
gatggtgactggacagcagatgactcctgggattttgacagcgtccctggagagcaagca
gtgcctgttgatactgcgtttatcttggaacgagtgtcgttctcccctcctgggtctgag
gagccacttgtgaaagacttaaacctgaaaataacccaaggcagcaacttaatgatcatg
gggaatacaggcacggggaagacatctctactgcgagtcctcaatgggctttgggaaagc
acacaaggttgtgttcggatggtgtcttgctttggcccccacggggtcctgtttctacct
cagaagcctttcttcacagatgggacactcagagagcaggtgatttatccactgaaggaa
atttatccagtcacaggagcagtggatgacgagagaatccttcggttccttaggatggca
ggactgttgtctttgttaaaaagaacaggagggctggatacgaaagttgactggaactgg
tatgatgttctctctcctggagaaatgcagcgactctcttttgtccgtcttttctatctt
cagccaaaatatgcagtgctagatgaagcaacaagtgctctgacggaagaggcagaggtg
gacctctatcgaacctgcaagcagttggggatgacagtgatcagtgtaggccatcggagc
agcctagagaagttccatgacttcatcctgaagctatgtggagacggaaaatgggaagtg
gtgaaaatcaaacaggagtga
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