Latimeria chalumnae (coelacanth): 102359438
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Entry
102359438 CDS
T02913
Symbol
CDH5
Name
(RefSeq) cadherin 5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04514
Cell adhesion molecule (CAM) interaction
lcm04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102359438 (CDH5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102359438 (CDH5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcm04515
]
102359438 (CDH5)
04090 CD molecules [BR:
lcm04090
]
102359438 (CDH5)
Cell adhesion molecules [BR:
lcm04515
]
Cadherins
Major cadherins
102359438 (CDH5)
CD molecules [BR:
lcm04090
]
Proteins
102359438 (CDH5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Stevor
AJAP1_PANP_C
DUF443
BT_3987-like_N
Motif
Other DBs
NCBI-GeneID:
102359438
NCBI-ProteinID:
XP_006003978
Ensembl:
ENSLACG00000011239
LinkDB
All DBs
Position
Un
AA seq
775 aa
AA seq
DB search
MDKFFLHLIQVVFCINIALADEENTISVLSISKSSNTHGQRVKRQWEWNQLYAVEENKKE
IPHLLGKIKSSITSSNAKYVLEGEGANSIFRVEPQNGDVYAWKRLDREEKSEYKLTALIV
DRNTGKKLDEPSDFTLKIIDINDNAPRFTLEFFNGSVPEMSSRGTSVVRVTAEDADDPTV
GAHAEIIYSIHAGSDYFVIENKTGIIRTKLSQLDREEKSSYEVVVEAKDMPGYQGGLSST
ATVIIKLTDINDNPPVFRQGNYSFNVLETIQVKSEVGRIKAEDADEPWNSNTKYDFIERA
ITDTFHIKTDANTKEGVITLKKPLDFETRKEYSFIVEATDPSINLQFIHGKPTKTRTTVN
IKVLDADEPPVFTAPFYRFEAYEDAPLRTVLGFVSAKDPDATRNSVRYSLGRSTDREPFF
QVLSNGNILSVKPFDRETNAWHNITVTANEIAPNGQKSDVTVTIKILDRNDNPPELATNP
EINICENVAEGTVIQTISAVDKDEMAPGVNFGFSLSKEENNFTLKDNQDNTAEIIIKRAG
FSHQEHTRYFLPVIITDNGTPLLSSTTTLSITVCSCTAEGKHIKCQRFAAATMGISVHAL
IAIFLCIVTIIVITLLIALRRKQKKNAFTGLGKDGDINEQLVRYDEEGGGEMDTNSYDVS
VLRSVRKNGARPREEIDVRPCLYAQVKKPAANGEMAVMIEVKKDEADNDRDGIPYDTLHI
YGYEGSDSLAGSLSSLETGSSDSEQDYDFLNDWGPRFKTLAELYGLEVNEGSHGY
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggataagttctttctccacttaatccaagtcgtcttctgcataaatattgctttggct
gatgaagagaacacaatatcagttttaagtatttccaaaagcagcaatacccatggtcaa
cgtgttaaaagacaatgggagtggaatcagctatatgctgtagaagaaaataaaaaagaa
ataccacacctattgggaaagattaagtcgagtataactagtagcaatgcaaaatacgta
ctagagggagaaggtgcaaatagtattttcagagttgaaccacaaaatggggatgtttat
gcttggaagagattggatcgagaggagaagtcagagtataaattaactgctctgatagtt
gatagaaatactggaaagaaacttgatgaaccttcagactttaccttgaagatcattgat
atcaatgacaatgctccacgatttacccttgaatttttcaatggatctgttcctgaaatg
tcttcaagaggaacttcggttgtccgagtgacagcagaagatgcagatgaccctacagtt
ggagcacatgctgagataatatatagtatccatgcagggagtgactattttgtaatagaa
aataaaaccggaatcatcagaacaaaactcagtcagcttgacagagaagaaaagtccagt
tatgaagttgttgttgaagctaaagatatgccaggatatcaggggggtctatcaagtact
gcaactgtcattattaagttgaccgatatcaatgacaatcccccagtttttcgacaaggg
aattatagcttcaatgtattagaaactatccaagtcaaatctgaagttggaagaattaaa
gctgaggatgccgatgaaccatggaattcaaacacaaaatatgattttatagaaagagct
attacagacacatttcatattaaaacagatgcaaataccaaagaaggagtaattacatta
aaaaagccattggattttgaaactagaaaggagtacagttttatagtggaagcaactgac
ccaagtattaatctccagttcatacatggaaaacctaccaagactcggaccacagttaac
atcaaggttctggatgcagatgaaccacctgtgtttactgctccattttacaggtttgaa
gcatacgaagatgcacctcttcgcactgttcttggtttcgtttctgcaaaggatcctgat
gcaaccagaaacagtgtcaggtattcccttggcaggtccactgacagagaaccttttttt
caagtgttaagcaatggaaacatattaagtgtgaaaccttttgatagagagaccaatgca
tggcataacattactgtaacagcaaatgaaattgcaccaaatggccaaaaatcagatgtc
accgtcactatcaagattcttgacagaaatgataacccacctgaacttgctaccaatccg
gagattaatatctgtgaaaatgttgcagaaggaacggtaatccaaacaatatcagctgtt
gacaaagatgaaatggcacctggagttaattttggcttttctttaagtaaagaagagaat
aattttactctgaaagataatcaagacaacacagctgaaatcataataaaaagagcaggt
ttcagccatcaagaacacactaggtacttcttgcctgttatcattactgacaatggcact
ccacttcttagcagtacaactaccctttccatcactgtctgcagctgtactgctgaaggg
aagcacattaaatgtcagcgtttcgctgctgctacaatgggaatcagcgtccacgcacta
attgctattttcctctgtattgtcacaatcatagtgatcacgctgctcattgcgttgagg
agaaaacagaagaaaaatgcatttactggtcttggaaaagatggagatataaatgaacag
cttgttagatatgatgaagaaggtggtggagagatggataccaacagttatgatgtttct
gtgctacgttctgtacgtaagaatggtgcaaggccaagagaggagatagatgttaggcct
tgcttgtatgcccaagttaagaaacctgctgctaatggagaaatggctgttatgattgaa
gtcaagaaggatgaggcagataatgacagagatggaattccctatgacacacttcatatc
tatggttatgaagggtctgattcacttgccggttcactaagttccttggaaacaggatct
tcagactctgaacaagattatgatttcttaaatgactggggacccagattcaaaacatta
gctgagctttatggactggaagtgaatgaagggagtcatgggtattaa
DBGET
integrated database retrieval system
