KEGG   Latimeria chalumnae (coelacanth): 102360154
Entry
102360154         CDS       T02913                                 
Name
(RefSeq) bromodomain and WD repeat-containing protein 3-like
  KO
K11798  bromodomain and WD repeat domain containing protein 1/3
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcm04121]
    102360154
Ubiquitin system [BR:lcm04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     102360154
SSDB
Motif
Pfam: Bromodomain WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz EIF3I WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C NBCH_WD40 ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_DCAF12 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_SPT8
Other DBs
NCBI-GeneID: 102360154
NCBI-ProteinID: XP_014347743
LinkDB
Position
Un
AA seq 1387 aa
MEPVFLSQTEAELYYLIARFLQSGPCQKAAQALVEELELHQLIPKRLDWQGKEHRRTFQD
WVAANVHIPSDYLLRICQQVGPLLDKEVPPSVPGVQTLLGVGRQSLLRTAKDYQSAVWRG
SALAALHRGRPPEPPVMHGKPPNIVNIASTRQLTGCGRYSHAIPSSMYQHMKMHRRILGH
LSSVYCVAFDRTGRRIFTGSDDCLVKIWAADDGRLLSTLRGHSAEISDMAVNYENTLLAA
GSCDKVVRVWCLRTCAPIAVLQGHSASITSIQIIGFVGGMFIATGSTDHVIRVYYLGSES
PEKIAELESHTDKVVAVQFCNNGDSLRFVSGSRDGSARIWQYQQQEWKSTVLDMTSRLAG
NNVAVGEDKVTKLKVTMVAWDRCDNTVITAVNNFLLKVWNSYTGQLLHVLSTRVQEDYRA
AKGDAEVNLYTVEKKRKPPHIIPRIDHQDSNARYLRRTQRKYQHAYQTRSTIEHLPPNTN
ENTRTPEDSDSSSEQENETAEMSEGSGDEAEVDWQSDSTSSDSSSEYSDWTADAGINLQP
PKRPTRQNARRICTLSDDDNVKEEKLPEEKRKKPKQTKQKKPKELLSMMGEPSDEWLPPQ
WIMDTIPRRSPFVPQMGDEVIYFKQGHEAYARAVRKAKVYSINPQKQPWNKLDLRENEQL
LLHSKFLYHDMPDVIDFLVLHQFYNEAKERNWQPGDKFRSIIDDAWWFGTVGSQQPFQPE
YPDSLFQCYTVRWDNNETEYMSPWDMEPIPEGTALPEETGAGVPVTPDECKALLYQPQEG
EWGAHSRDEECERVIQGIEQLITLDFASPFSAPVDLAAYPLYCTVVAYPTDLSTIKKRLE
NRFYRRISALMWEVRYIEHNARTFNETDSTIVKSAKIVTDVLLHFISDQSCTDILEIYNK
VKAENLSSAEEEEEEAEVEVDSDAPGTSSGRMRHRTRQLTKMQTSQLGVDSWNNQCKELL
NLLFQCEDSEPFRQPVDLFAYPDYRDIIDMPMDFHTVKETLQAGNYQNPLEFGRDVRLIF
SNSKAYTPNKKSRIYSMTLRLSALFESLIKAVISDYKSALQRQKRSKRTPRYRKRLRSSS
SSPSSSRASSPKGRHKQAKILLKSSLHTSLPVTRASSTRSSRDTTEEPLESLLYEETDNP
PSSSGINSLDRARSSLEPGATRMTRSKTTPMKQNQFANGPLLTDDGQGTHAAVKRKLVTK
SEEGESSNEEKKREADDDSSSSSSSSSSSSSSSSSTNSKKSRSSSSSASRSESDSDSDSS
SGSNQDFIDGDHDYSKAVRTRPKRKTKAKAPNRKGKSPKGGGTKATSSSKRAHISDEEDE
EELEQVIKQPRIKTRNQGRRTVLYNDDSEDDSFVSTGDPLNLGTSRSGRVRKMTEKARVS
HLMGWNY
NT seq 4164 nt   +upstreamnt  +downstreamnt
atggagccagtgttcttgtcgcagactgaagccgaactctattacctgatagcccggttc
ctgcagtccggaccctgtcagaaagcggcacaggcgctggtggaagagctcgagctgcac
cagctgatccccaaacggctggactggcaaggcaaggagcaccggcggactttccaggat
tgggtggcagccaacgtgcacatcccttcagactacttgcttcgaatttgccagcaagtc
ggtccccttttggataaggaggttcccccaagtgtccctggagtacagaccttactggga
gtgggaagacagtctctgctgaggacagcaaaagattaccagtcagcagtatggagaggc
tcagcgctggcagctttgcacagagggaggccaccagaacccccagtaatgcatggaaaa
ccaccaaacattgtaaacatcgccagcaccaggcagctcactggatgtggacgatacagc
catgccattccatcctccatgtatcagcatatgaaaatgcacaggaggatcctgggacat
ctctcctctgtgtattgtgtggctttcgaccgtacagggaggcgaatattcacagggtca
gatgattgcttggtgaagatctgggcagcagatgatggccggctgctctccactctgcgc
ggccactcggcggagatctccgacatggctgtcaactatgagaacacgctgctcgctgct
ggaagctgtgacaaagtggtgcgtgtgtggtgtctccgaacctgtgctcccattgcagtg
ctccagggccattccgcctccatcacctcaatccagataattggttttgtaggtggaatg
tttattgctactggtagcacagaccatgtgattagagtgtactacctgggttctgagtcc
ccagagaaaattgcagagttggagtcgcacacggataaggttgttgctgttcagttctgt
aacaatggtgacagtttgcgatttgtgagtggaagcagagacggaagtgccaggatctgg
cagtatcagcagcaggaatggaaaagcaccgtgttagacatgacttccaggttagcaggg
aataatgtagcagttggagaagataaagtgaccaaactgaaggtgactatggtggcttgg
gatcgttgcgacaatactgtcatcactgctgtcaacaactttctgctcaaagtgtggaac
tcgtacacaggacagctcctccatgttttatcaacaagggttcaagaggattaccgagca
gcaaagggggatgctgaagtgaatctttacactgtagaaaagaaaaggaaaccacctcat
atcattccgcggattgaccatcaggattccaatgcccgctacttgaggcgaacccaacgg
aagtaccagcacgcttaccagacgcggtccactattgagcacctccctcccaacactaat
gagaacacgcggaccccagaggactcggatagctcctccgagcaagaaaatgagacagct
gaaatgagtgagggatccggggatgaagcagaggtcgactggcagagcgacagcacttcg
agtgactcttcaagtgaatattctgactggaccgccgatgccgggattaatctccagcct
ccaaaaagaccaaccaggcagaatgctcggagaatctgtaccttgtctgatgacgacaat
gtgaaggaagaaaaattacccgaggagaaaagaaagaaaccaaaacaaacgaaacaaaag
aaaccaaaggagctgctttctatgatgggtgaacccagtgatgagtggcttcctccgcag
tggataatggatacaatacctcgccggtcaccctttgtcccacagatgggagacgaggtt
atctattttaaacaaggtcacgaagcctacgctcgggctgttcgtaaagcaaaggtgtac
agtattaatcctcagaaacaaccttggaacaaactggatctcagggagaatgaacagtta
cttttgcattccaagttcctgtaccatgatatgcctgatgtcattgattttctggtttta
catcagttctataatgaagcgaaagagaggaactggcaacctggggataagtttcggagt
atcattgatgatgcctggtggtttggaacagtgggaagtcagcagcctttccagccagag
tacccagacagtttattccagtgctatactgttcgatgggacaacaatgaaacagaatat
atgagtccgtgggacatggagccgatcccagaagggactgctcttccagaagagactggg
gccggcgttcctgtcaccccagacgagtgcaaagcacttctgtaccaacctcaggaagga
gagtggggggctcattctcgggatgaagaatgtgaaagggttattcaggggattgagcag
cttataactctcgattttgcctcccctttctctgctccggtggatctggctgcctatccg
ttatattgcactgtggtggcttatccaactgacctcagtactatcaagaagaggcttgaa
aaccgattttacagaaggatctctgctctgatgtgggaggtgcggtatattgaacacaat
gccagaacttttaatgagactgacagcactatagtgaaatcagccaagatcgtcacagat
gtgttactacactttataagtgatcaaagttgcacagatattttggagatttataataaa
gtgaaggcagaaaacctcagcagtgctgaagaggaagaagaggaggctgaagtagaggtg
gattctgatgccccgggaacttcttcaggaagaatgcgccatcgtacaaggcagttgact
aagatgcagacatcacaacttggtgttgattcctggaacaatcagtgcaaagaattacta
aacctgctgtttcagtgtgaggattcggagccattcaggcagccagttgacctctttgca
tatccagattaccgtgacatcatagacatgccgatggacttccacactgtgaaagaaacc
ctgcaagcaggaaactaccaaaaccccttggaatttggcagggatgttcggctaatattc
agcaactccaaagcatacactcccaacaaaaagtcacggatctacagtatgactctccga
ctctctgccttgtttgagtctcttattaaagctgtaatttctgattacaagtctgctcta
caacgccagaagaggagtaaacggacaccaaggtaccgcaaacggttacggagcagcagc
agctctccatccagcagcagagcctccagtccaaaaggaaggcataaacaagcaaagatc
ctgctgaaaagtagcctgcatacctcactgcctgtcaccagagccagttctacaagatca
tctcgagatactacagaggaacctctggagtccctcctatatgaagagacagataaccca
ccctcctcctctggcataaattccttggatcgagccagaagcagcttggagccaggagcc
acccggatgaccagaagtaagacgacgcccatgaaacaaaaccaatttgctaatggccct
ttactgactgatgatggccaagggacccatgctgctgtcaaaaggaagcttgtcacgaag
tcagaagaaggggaaagttcaaatgaagagaagaaaagggaagcagatgatgactccagt
tcctcatcgtcatcttcatcctcttcatcctcttcctcctcctccactaacagtaagaag
tctaggtccagttcaagttctgccagcaggtctgaatccgattccgattctgactctagc
tcgggatccaatcaggattttattgatggagatcatgattacagcaaagctgtccggaca
agacctaaaaggaaaacaaaagcgaaagccccaaacaggaagggcaagagccccaaagga
ggtggtaccaaagccaccagcagtagcaagcgagcgcacataagtgatgaagaggatgaa
gaagaactcgagcaggtgattaaacagccaagaataaagaccaggaaccagggcaggagg
acggttttatacaacgacgactccgaggatgatagctttgtgagcactggggatcccttg
aacctggggacctccaggtctggccgagttcggaaaatgaccgaaaaagccagagtcagc
catctaatggggtggaattactaa

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