Latimeria chalumnae (coelacanth): 102363527
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Entry
102363527 CDS
T02913
Symbol
SAMD4A
Name
(RefSeq) sterile alpha motif domain containing 4A
KO
K27396
protein Smaug
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102363527 (SAMD4A)
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102363527 (SAMD4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
PHAT
SAM_3
Motif
Other DBs
NCBI-GeneID:
102363527
NCBI-ProteinID:
XP_005986533
Ensembl:
ENSLACG00000019062
UniProt:
H3BIH5
LinkDB
All DBs
Position
Un
AA seq
705 aa
AA seq
DB search
MMFRDQVGMLAGWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLADCTELHILEG
EANNPAIINQWHQESKDKVISLLLTHLPLLKPGNIEAKVEYMKLLPKILAHSIEHNQHIE
ESRQLLSYALIHPATSFEDRSALAMWLNHLEDRTSNSCFISQSRGRSDSLDYGQTHYYHQ
RQNSDDKLNGWQTPRDSGICVSASNWQDKNLGCENGHLPLYSSSSVPTTINTIGTNTNTI
LSSQTHHSPLKRSVSLTPPMNVPNHPLGHGWMSHEDLRARGPQCIQTDHAPLSPQSSVAS
SGSGGSEHLEDQPTSRNTFQEEGSGMKDVPTWLKSLRLHKYAALFSQMTYEEMMALTERQ
LEAQNVTKGARHKIVISIQKLKERQNLLKSLEKDILDNGSLRAPLQELHQMILTPIKAYS
STQNLNADDHSRDLNSQSSLLSTDSPNTEGKDIVSGGISQHHLTGCEGESGGVPVPEGDL
PGQFTRVMGKACTQLLVSRPDEENISSYLQLIDKCLIHEGFTETQKKRLLSWKQQVQKLF
RSFPRKSLLDMSGYRQQRSRGFGQSNSLPTAGSISGGMGRRNPRQFQMPSRNLPTARLGL
LGPSGLLGATQRSVASNPSILKQGRQNLWFANPGGNNSMPSRTHSSVQRTRSLPVHTSPQ
TMLMFQQPEFQVPVTEPDINNRLESLCLSMTEHALGDGVDRTSTI
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgagatcaggttggcatgctggctggctggtttaaaggctggaatgaatgc
gaacagactgttgctttgctgtccttgttgaaaagagtgagccggacccaagctcgattc
ttgcagctctgtttggagcattctttggcggattgtaccgagctgcacatcctggaagga
gaagccaataacccggcaatcattaaccagtggcaccaagaatccaaggacaaagtgata
tccttattgctcacccacctgccgttactaaagccagggaatattgaggcaaaagtggag
tacatgaagctgttacccaagattttggctcattccatcgaacacaaccagcacatcgaa
gagagccggcaacttctgtcatatgccttgatccacccggccacctcatttgaggaccga
agtgcactcgccatgtggctcaaccacttagaggatcgcacatcgaatagttgttttatt
agccaaagcagaggtcggtccgactcattggattatgggcagacgcattactatcaccaa
aggcagaactccgacgataagcttaacgggtggcagacccctcgggattctgggatatgt
gtgagcgcttctaactggcaggataaaaatttgggatgtgaaaatgggcatttgcccttg
tattcttcctcttcggtacctacaacgatcaacacgattggaactaacacaaacacaatt
ctctcaagtcagacacatcatagtcctctgaagcgttctgtttctctcactccaccaatg
aatgtgccaaaccaccctttaggacatggatggatgtcccatgaagacctgcgagcaaga
gggcctcaatgtatccaaacagatcatgcacccttatccccacagagcagcgtggcctcc
tcaggaagtggcgggagcgagcatctggaagatcagccaacaagtcgcaacacattccag
gaagagggcagtggcatgaaagatgtgcctacatggttaaaaagcctacgcctacacaag
tacgcagcgcttttctctcagatgacatatgaagaaatgatggcacttactgaaagacaa
cttgaagctcagaatgtcaccaagggtgcgagacacaaaatagttatcagtatccagaaa
ctaaaagagagacaaaacctgctgaagtctttagaaaaggatatactggacaatggcagt
ctgcgtgctccattacaagaattgcatcaaatgatcctcaccccaatcaaagcttacagc
tccacgcagaatttaaacgcagacgatcacagccgggacctgaactcccagtcatccctg
ctcagcactgacagcccaaatacagaaggcaaggatattgtatctggaggaatctctcag
caccatctgactggttgtgagggggagtctggaggtgttcctgtaccagagggagatctt
cctggacagtttacaagagtcatgggaaaagcgtgcacacaactattggtttctagacca
gatgaagaaaacataagttcttacttacagcttatagacaaatgtttaattcatgagggc
tttacagagacgcagaagaagagattattgtcatggaaacaacaggtgcagaaactcttt
aggtctttccctcggaaatccctcttagacatgtcaggctatcgacagcaaagaagtcgg
ggatttggacagtctaactctttaccaacagctggctctataagtggaggcatggggaga
agaaacccacgtcagtttcagatgccctctcgaaatcttcctactgctcggcttggcctc
ttaggccctagtggactgctgggtgcaacacaacgcagtgtggctagcaaccccagtatt
ctcaaacaagggagacagaacctatggtttgctaaccccggggggaacaacagcatgcca
agtcgaacccatagttcagtccaaaggacacgttcactgcctgtccacacgtcaccacag
accatgctgatgttccagcagccagagtttcaagtgccggtgacagaacctgatatcaat
aaccgactggagtcactgtgcctcagtatgactgaacatgccctaggagatggagtcgac
agaacttctactatctag
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