Latimeria chalumnae (coelacanth): 102364907
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Entry
102364907 CDS
T02913
Symbol
SCN2A
Name
(RefSeq) sodium channel protein type 2 subunit alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102364907 (SCN2A)
Ion channels [BR:
lcm04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102364907 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
FUT8_N_cat
FraC
Motif
Other DBs
NCBI-GeneID:
102364907
NCBI-ProteinID:
XP_014348549
Ensembl:
ENSLACG00000007567
LinkDB
All DBs
Position
Un
AA seq
2013 aa
AA seq
DB search
MAQHILVPPGPDSFRLFTRESLIAIENRIAEENAKKPKQDHRDDDDDNGPKPNSDLEAGK
SLPFIYGDIPPGMVSQPLEDLDPYYSNQKTFIVLNRGKAIFRFSATPALYILSPFNPLRK
VAIKILVHSLFSMLIMCTILTNCVFMTMSNPPEWAKNVEYTFTGIYTFESLIKILARGFC
IESFTFLRDPWNWLDFSVILMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLKQKCVYWPPPNFSIGENVTTFNSSMD
INVTVPNQMSTFENDTYLNDKANYYFLPGEKDALLCGFSSDAGQCPEGFICMKVGRNPNY
GYTSFDTFSWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLILA
VVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAASATEMGDASEGG
IGLCESSSEASKLSSKSAKERRNRRRKRKQKEQGEEMWDNEKFHKSESEDSIKKRGFRLS
IDGNRLTYEKKYSSPHQSLLSIRGSLFSPRRNSRTSLFSFKARTKDIGSENDFADDEHST
FEDNDSRRGSLFVPHRQYERRNSNISQSSRSSRILSVLPANGKMHSTVDCNGVVSLVGGP
SVPTSSVGQHLPEVIINKAATDDNAITTETEVLKRRSGSHQVSMDLLEDPTLRQRALSVA
SILTNTMEELEDSRQKCPPCWYKFANKYLIWDCCPQWLRIKEIVNMVVMDPFVDLAIIIC
IVLNTLFMAMEHYPMTENFSSVLSVGNLVFTGIFTAEMCFKIIALDPFYYFQEGWNIFDG
IIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVL
AIIVFIFAVVGMQLFGKNYKECVCKIAENCELPRWHMNDFFHSFLIVFRVLCGEWIETMW
DCMEVSGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVG
RIQRGIDYFKRTLRDFFQKTCVRRKKVLEDIKPLEELNNKKDSCISNHTTVEISKDVDYH
KDGNGTTSGIGSSVEKYMIDESDYMSFIHNPSLTVTVPIAVGESDFENLNTEEFSSESDL
EESKEKLNVSSSSEGSTVDIMPPGEGEQPEVEPEESLEPEACFTEGCVQKFQCCQVNIEE
GDGKTWWNLRKTCYRIVEHNWFETFIIFMILLSSGALAFEDIYIEQRRTIKTMLEYADKV
FTYIFILEMLLKWVAYGFVKYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTL
RALRPLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCIN
TTTEERLPDSVVNNYSDCALLNESARWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAA
VDSRGVGEQPIYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMT
EEQKKYYNAMKKLGSKKPQKPIPRPLNKFQGMVFDFVTKQAFDIIIMILICLNMVTMMVE
TDNQSKEMEKNLYWVNLVFIVLFTGECILKLISLRHYYFTIGWNIFDFVVVILSIVGMFL
ADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVM
FIYAIFGMSNFAYVKKESGIDDMFNFETFGNSMICLFQITTSAGWDGLLSPILNSGPPDC
DPEKDHPGSSVRGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESAEPLS
EDDFEMFYEVWEKFDPDATQFVEYAKLSNFADALEPPLRVAKPNKIQLIAMDLPMVSGDR
IHCLDILFAFTKRVLGEGGEMDALRQPMEERFMASNPSKISYEPITTTLRRKQEEVSAIV
IQRAFRGYLIKQTVKQASFMYKKDKGKGNNLTDKEEMVIDKFNETSTTEKTDMTPSTTSP
PSYDSVTKSDKNKYEKDKVEKENKGKDVRENKN
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcatattcttgtaccgccaggaccagacagcttccgcctatttactcgtgaa
tctctgatagcaattgaaaaccgaattgcagaagaaaatgctaaaaaacccaaacaagac
catcgagatgatgatgatgacaatggaccaaagcctaatagtgacttggaagcaggaaaa
tcactgccatttatttatggtgacatacctccaggaatggtttcacaacccttggaggat
ctggacccatattatagcaatcagaaaacttttatagtattgaacagagggaaggctatc
ttccgatttagtgccacacctgccttgtacattttaagtcctttcaatcctctcagaaaa
gtagctattaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgtgtgtttatgaccatgagtaaccctccagaatgggcaaagaatgtagagtac
acattcactggaatatatacttttgaatcactaattaaaattcttgcaaggggcttctgt
atagaaagtttcacttttcttcgtgacccatggaactggctagatttcagtgtcattcta
atggcgtatgtaacagaatttgtaaacctaggcaatgtttcagctctacgaactttcaga
gtattgagagctttgaaaactatttctgtaatcccaggtttgaagacaattgtgggtgcc
ctaatccagtctgtgaagaaactctcagatgtaatgattctgactgtgttttgtctaagt
gtatttgcactaatagggctgcagctatttatgggcaacttgaaacaaaaatgtgtgtac
tggcctccaccaaatttttctattggagaaaacgttactacctttaacagctcaatggac
ataaatgttacagtacctaatcaaatgagcacatttgagaatgatacatacctcaatgat
aaagcaaactattacttcctacccggagaaaaggatgctctgctttgtgggttcagctca
gatgctggtcaatgtcctgaggggttcatatgtatgaaagttggcagaaaccctaattat
ggatacacaagctttgatacattcagttgggcattcttgtcattgtttcgactgatgact
caggactactgggaaaatctgtatcagctgacgctacgcgctgctggaaaaacatacatg
atattttttgtgctggttatttttttggggtcattctatttggtaaacctaatcttggct
gtagttgctatggcttatgaagaacaaaaccaagcaacacttgaagaagctgaacagaaa
gaggcagaatttcagcagatgcttgaacaactcaaaaaacaacaagaagaagctcaggct
gctgcagcagctgcttctgcagcatcagcaactgagatgggagatgcaagtgaaggaggt
ataggattatgtgaaagttcatctgaagcatcaaaactaagttcaaagagtgccaaagaa
agacgaaacagaaggagaaaaagaaaacaaaaagagcagggagaagaaatgtgggataat
gagaagtttcacaaatcagaatcagaggatagtataaaaaagagaggcttccgcctatct
attgatggaaatcgattaacatatgaaaagaaatattcttccccacaccagtcactgctg
agtatccgtggctcccttttttcaccaaggcgcaacagtagaactagtctcttcagtttc
aaagcacgaactaaggatatagggtcagaaaatgattttgctgatgatgaacacagcact
tttgaagacaatgacagcagaagaggttcactttttgtcccacacaggcaatatgagaga
cgcaacagtaatattagtcagagcagtagatcatccaggatactgtcagtgcttccagcg
aatggaaaaatgcatagtactgtggactgcaatggagtggtttcactggtcggtggccca
tcagttccaacatcatctgttggacagcatctgccagaggtgataataaataaagcagct
actgatgacaacgccatcactactgaaactgaagtgctgaagagaaggtctggttctcat
caagtttccatggatttacttgaagatccaactctgagacagagagctcttagcgtggcc
agcatactaacaaacacaatggaagaacttgaagactctcgacagaaatgcccaccatgc
tggtataaatttgccaacaaatatttaatttgggactgctgccctcagtggttaagaata
aaagaaatagtaaatatggttgtaatggatccctttgtggatcttgctattatcatctgt
atcgtcttaaacacactctttatggctatggagcattacccgatgacagaaaactttagt
agtgtgctttcagtaggaaacctggtgtttactggaatctttactgctgaaatgtgtttt
aaaatcattgccctggatcctttctattatttccaagaaggctggaatatttttgatggt
ataattgtaagtctaagcttaatggagctaggtcttgcaaatgttgaaggattgtcagtc
ctaagatcattccgtctgctcagagtgtttaaactggcaaagtcttggccaacactaaac
atgctaatcaagatcattggcaactctgtgggagctctgggtaacttgacattagtgttg
gctatcattgtcttcatctttgctgtggttggtatgcaactgtttgggaagaactacaaa
gaatgtgtttgcaagatagctgaaaactgtgaacttcctcgctggcacatgaatgacttc
tttcactctttcctaattgtatttcgagttctatgtggagaatggattgagacaatgtgg
gattgtatggaagtatctgggcagactatgtgcctcatcgtttttatgatggttatggtg
attggcaatcttgtggtacttaatctatttctggccttgttgctgagctcatttagtgca
gacaaccttgctgcaacagatgatgacagtgaaatgaataatttacagattgctgttgga
aggatacaaaggggtattgattattttaaaagaacgttacgtgactttttccagaaaact
tgtgttagaaggaagaaagttttagaggatatcaaaccattagaagaactgaacaacaaa
aaagacagttgtatttcaaaccacactacagttgagataagcaaagatgttgattatcat
aaagatggcaatggaacaactagtggaattggcagtagtgtggaaaaatacatgattgat
gagagtgattatatgtctttcatacacaatcctagcctcacagtaacagtacctattgct
gttggggagtctgactttgagaacctaaacacagaggaatttagcagtgaatcagacctt
gaggagagcaaagagaaacttaatgtgtccagctcatccgagggcagtactgttgatatt
atgccacctggagaaggtgaacagccagaagttgaacctgaagaatctcttgaacctgag
gcatgctttacagaaggatgtgttcagaagttccagtgctgtcaagtgaacatagaagaa
ggtgatggcaaaacatggtggaacttaagaaaaacatgttatagaatagtggagcacaac
tggtttgagaccttcattatctttatgattcttctcagtagtggtgccctggcttttgaa
gacatatatattgaacagagaaggactattaagactatgctggaatatgctgataaagtc
ttcacttacatctttattctggagatgcttctgaagtgggtggcctatggatttgtgaag
tactttacaaatgcctggtgctggctggactttctaattgttgatgtctctcttgttagc
ttagtagctaatgccttgggctactcggaactaggtgccattaagtcccttaggacacta
agagctttgagacctctaagggccctgtcacgatttgaagggatgagggtggtcgtcaat
gctcttataggtgcaattccatccataatgaatgtgctgctggtctgtctcatattctgg
ctcattttcagtataatgggtgtgaatctgtttgctggaaagtactactactgcattaat
accacaactgaggagaggcttccagattcagttgttaacaattacagtgactgtgcactt
cttaatgaaagtgctcgctggaaaaatgtgaaaatcaattttgacaatgtaggagctgga
tatcttgcacttcttcaagttgccacatttaaaggatggatggatattatgtatgcagct
gttgattcccgtggtgtaggagaacaacctatatatgaagataacctttatatgtatctt
tattttgttatcttcattatttttggatcattctttaccctaaatttgtttattggtgtc
atcattgacaactttaaccagcaaaagaaaaagtttggaggtcaggacatcttcatgaca
gaggaacaaaagaaatattacaatgccatgaaaaagctgggatccaaaaaaccacagaag
ccaataccaagacctttgaacaagttccaaggcatggtgtttgattttgtaactaaacaa
gcatttgatatcatcatcatgattctcatttgccttaacatggttaccatgatggtagaa
acagataaccagagtaaagaaatggagaagaatttatactgggttaacctagtgtttatt
gtcctttttactggagagtgtatactaaagctgatttcactccgccactattacttcacc
ataggatggaacatttttgattttgtggttgttattctttctatagttggcatgttttta
gctgacatcattgagaagtattttgtgtcaccaacgttgtttagagttattcgacttgca
agaattggtcgtatcctgcgacttattaagggtgctaaagggattcgtaccctgcttttt
gctttgatgatgtcacttcctgcattgttcaacattggtctcttgcttttcttggtcatg
tttatatatgctatatttggtatgtctaacttcgcctatgtcaagaaggaatctggtata
gatgatatgttcaattttgaaacctttggcaacagtatgatttgcctgttccagataacc
acatctgctggttgggatggcttgttatccccaattctcaacagtggaccaccagattgt
gaccctgaaaaagaccatccaggcagctctgtaaggggagactgtggtaatccatctgta
ggaatatttttctttgtcagctacattatcatatcttttctaattgtggttaacatgtac
attgccattattttggaaaacttcagtgttgctacagaggaaagtgctgaaccactgagt
gaggatgactttgagatgttctacgaagtttgggagaagtttgaccctgatgcaactcaa
tttgtggaatacgcaaagctgtctaattttgcagatgctttggaaccacctctgcgtgta
gcaaagccaaacaaaattcaacttattgctatggatttgcccatggtaagtggtgacaga
attcactgccttgatatcttatttgcttttacaaagcgcgtgttgggtgaaggtggagaa
atggatgctctacgtcagccaatggaagaacgttttatggcatctaatccctctaagatc
tcttatgaaccaatcacaaccactttacgacgcaagcaagaagaggtgtcagccattgta
attcagagggcttttagaggatatcttataaagcaaactgtaaaacaggcttctttcatg
tataagaaagataaaggtaaaggaaataatctaactgataaagaagaaatggttatagat
aagtttaatgaaacctccactacagaaaaaacagacatgactccctctaccacttcccca
ccatcttacgatagtgtaacaaagtcagacaaaaacaaatatgaaaaagacaaggtagaa
aaagaaaacaaaggcaaagacgtaagggagaataagaattaa
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