Latimeria chalumnae (coelacanth): 102367427
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Entry
102367427 CDS
T02913
Symbol
RORB
Name
(RefSeq) RAR related orphan receptor B
KO
K08533
RAR-related orphan receptor beta
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102367427 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lcm03310
]
102367427 (RORB)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102367427 (RORB)
Nuclear receptors [BR:
lcm03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
102367427 (RORB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF4336
Motif
Other DBs
NCBI-GeneID:
102367427
NCBI-ProteinID:
XP_014349560
Ensembl:
ENSLACG00000006103
LinkDB
All DBs
Position
Un
AA seq
480 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDATSRCHPNTWCSFEVETAVKFGRMSKKQRDSLYAEVQKHQQR
LQEQRQQQGGEAEALARVYTSSISNGLSTLNNEIGGTYANGHIIDLPKTESVSSGYYSVD
STQPSPDQSGIDVIGIKQIKQEPIYDLTPVPNLFTYSSFTNGQLAPGVTMTDVDRIAQNI
IKSHMETCQYTVEELQQLAWQTHTYEEVKVYHSKTREMLWQQCAIQITHAIQYVVEFAKR
ITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKTLGSDDLV
TAAFDFAKSLCSLQLTEEEIALFSAAVLISPDRPWLLEPRKVQKLQEKVYFALQHVIQKN
HLDDDTLAKLISRIPTITALCNLHSEKLQAFKLSHPETVNTLFPPLYKELFNPDSTTGCK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaattgaagtgataccatgcaaaatctgtggagataagtcttctgggatc
cattatggagtcatcacgtgtgaaggctgtaagggtttcttcaggaggagtcaacagaac
aatgcctcatactcttgccctcgacagagaaactgtttaattgacaggactaatagaaac
cgttgccaacactgcagattgcagaaatgtcttgcccttggaatgtctcgggatgcaaca
agtcgctgtcaccccaatacatggtgttcttttgaagtggaaacagctgtgaagttcgga
aggatgtccaaaaagcagcgggacagcctgtacgcagaggtccagaagcaccagcagcgg
ttgcaggagcagcggcagcagcaagggggcgaggcggaggccctggcacgggtctacacc
agcagcatcagcaacggcctgagcactctcaataacgagattggggggacctacgcaaat
ggacacataatcgacctgcccaaaacagagagcgtcagcagtggctactacagtgtggat
tccacccagccttccccagatcagtctgggatagacgtgatcggaatcaaacagataaag
caggaacccatttacgatctcacccctgtaccgaacttgtttacatacagttcttttaca
aacggtcaactggcccctggggtcaccatgacagatgtagatcgaattgcacaaaatatt
attaagtcccacatggaaacctgtcagtatactgtggaggaactgcagcagctagcgtgg
cagacccacacatatgaggaagtcaaagtgtatcacagcaagacacgagagatgctgtgg
cagcagtgtgcaatccagatcacacatgccatccagtatgtggttgaatttgccaagagg
ataacgggattcatggagttatgtcagaatgaccaaattcttctcctaaaatcaggttgt
ttggaggtggtgttggtgagaatgtgccgtgccttcaacccactgaacaacactgtttta
tttgaagggaaatatggaggaatgcagatgtttaaaacgcttggttctgatgatctagtg
actgcagcttttgactttgcaaagagtctgtgttctcttcaactgactgaggaggaaata
gctttgttttcagcagctgtattaatatcgccagatcgaccttggctgctggaacccaga
aaagtccagaagctgcaggagaaggtctattttgcactacaacacgtaattcaaaagaat
caccttgatgatgacaccttggcaaagctaatttccaggatcccaacaataactgcactt
tgcaacctgcactcagaaaaactacaggcatttaaactgtcccacccagagacagtcaat
acgctgtttcctcccttatacaaagagctttttaatccggactctaccactggctgcaag
taa
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