Larimichthys crocea (large yellow croaker): 104922412
Help
Entry
104922412 CDS
T04659
Symbol
aqr
Name
(RefSeq) RNA helicase aquarius isoform X1
KO
K12874
intron-binding protein aquarius
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104922412 (aqr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104922412 (aqr)
Spliceosome [BR:
lco03041
]
Complex B
Other components
Prp19-related factors
104922412 (aqr)
Complex C
104922412 (aqr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
AAA_16
DEAD
SLFN-g3_helicase
UvrD_C_2
UvrD-helicase
AAA
Parvo_NS1
AAA_22
PhoH
DnaB_C
nSTAND3
Motif
Other DBs
NCBI-GeneID:
104922412
NCBI-ProteinID:
XP_019132715
LinkDB
All DBs
Position
XXIV:complement(7326824..7373395)
Genome browser
AA seq
1473 aa
AA seq
DB search
MATMEKETPAKKAAAPSVSQINAEYVTQLANKYWAPHAKNKLPFDPKVMEDVYEKEILKS
KFAIRKIMLLEFSQYLENYLWVNYTPEVSSNAYLMSICCIVNEKFRENVPAWEVFKKEPS
HFPYFFKCVMQAVLAGDEAGLTLKEQTVLLVFLDHCFNSLEVDLIREQVQQLISLPMWMC
LLPSRLQQELKKVPKLQKFWNLIKKKFDKMDADAAEQAKKERAFLSALIKKFLGVLTSIP
PSGPVSMDKVHYCERFIELMIDLEALLPTRRWFNTVLDDSHLVVSCHLSSLVQREKEGHL
FCQLLDMLKFYTGFEISDQTGNALTEKEMTTLHYDRITSLQRAAFAHFPELHDFALSSIA
AVDTRESLTKHFGHLSPNTLHQVASYLCLLPELPEGQDTTYEKEVLLELLVSRHERRISQ
IEQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLES
TYEIRQDIEDVVWRMKPWQSEYGGVVFGGWARMAQTITSFSIVEVAKPNIGESWPARVRA
DVTVNLNVQDHIKHEWEGLRKHDVCFLITVRPNLPYGTRFDRRQPFVEQTGLVYVRGCEV
QGMLDDKGRVIEEGPDPKPKLRGDARTFRVWLDPNQYQQDMTSSIQSGTEDPYETFNVIM
RRKPKENNFKAVLETIRNLMNTECVVPDWLHDIILGYGDPGSAHYSKMPNQISTLDFNDT
FLSLDHLRSCFPGYTIKVTEENPELQVFPFRIKFPISNKTDKGKKRKADEEEEDKEEDMT
LIVEPYVTPNRGPYPYNQPKRNTIQFTPTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQI
ISNLYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYG
RVNYVLARRLELLREVGRLQESLDVPGDVSYTCETAGHFYLYQVISRWEEYMSKVRPKQG
KKVEVQDVAAHFPFHKYFSNAPQPVFKGRSYEEDMDIAEGCYRHIKKIFTQLEEFRAFEL
LRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEEAAQILEIETFIPL
LLQNPEDGYSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRLGVPTIDLDAQ
GRARASLCNLYNWRYKHLGNLPHVQQLPEFQVPNPGLTFDFQLINVEDFNGVGESEPNPY
FYQNLAEAEYAVALYMYMRLLGYPADRISILTTYNGQKHLIRDVINQRCAGNPFFSQPNK
ITTVDRFQGQQNDYIILSLVRTKAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFEL
TPAFNQLTARPQQLHIRPHEYYSQEQPRDASGQPDQIIKNMPEMANLVYNMYMHMMQTSQ
KYRQQQQEKLALPPQQAKTDALAEKAPASSGEPQEETPMEQETPEAEAKPEPNSEDTSEK
KENEDTADHAKMPEHPGRDSDSDGEDSGGEKEQ
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaaagaaacccccgctaaaaaggctgcagcgccttctgtgtctcag
atcaacgcagaatatgtcacgcagttggctaacaaatattgggctcctcatgcaaagaat
aaactaccatttgacccgaaggtgatggaagatgtttatgaaaaagagattctcaagtcc
aaatttgccatcagaaagattatgctgcttgagttcagccagtatcttgagaactacctg
tgggtaaactacacacccgaggtgtccagcaatgcctaccttatgtccatttgttgcatc
gtcaatgagaagttcagagagaatgtcccagcctgggaggtgttcaagaaggagcccagc
catttcccatacttcttcaaatgtgtgatgcaagccgttctggcaggtgatgaagctggc
ctcactctgaaggaacaaaccgtgctgctggtcttcctggaccactgtttcaacagtctg
gaggtagatttgatcagagagcaggtgcagcagctcatctctctgcctatgtggatgtgc
ctcctaccatccagactccagcaggagctgaagaaagttccaaagctgcagaaattctgg
aatctaatcaagaagaaatttgataagatggatgctgacgcagctgagcaggcaaaaaaa
gagagggctttcctctcagctctcattaaaaagtttcttggagtcctcacatccattcca
ccatcagggcctgtatccatggacaaagtacattactgcgagagattcattgaactcatg
attgatttggaggcactcctgcccaccagacgttggttcaataccgtgttggatgactct
cacttggtagtcagctgccacctgtccagtcttgtccaaagagagaaggagggacacctc
ttctgtcagttgctggacatgctgaagttctacacaggttttgagatcagtgatcagaca
ggaaatgccctgacggagaaagagatgaccactctgcactatgatagaatcacctccctg
cagagggcagcttttgctcattttccagagttgcatgactttgctctgtccagcatagca
gcagtcgacactcgagaatccttgaccaaacactttgggcatctcagtcccaatacactt
caccaggtggcgtcatatctgtgtctgctgccagagctgcctgaagggcaagacaccacc
tacgagaaggaggttctccttgagctgctggtttcccgtcatgagcgcagaatctctcag
atcgagcaacttaaccagatgcccctttatccaacagagaagataatctgggatgagaat
atcgtccccacggagtactactcgggggaaggctgtctagcattacccaagctgaatctc
cagttcctgaccctacacgactacctgttgaggaactttaacctcttccgcctggagtcc
acctatgagatcagacaggacattgaagatgtggtgtggcgtatgaagccatggcaatca
gagtacggcggagtggtgtttgggggctgggccaggatggctcagacgatcacctccttt
tccatagtcgaggttgccaagccgaacatcggagagagctggcctgcccgtgtgcgagcc
gatgtcactgttaacctcaatgtacaagatcatatcaagcatgagtgggaagggctgcgg
aagcacgacgtttgctttctgatcacggtgcggcccaacctgccctacggcacgcgcttc
gaccgacgacagccctttgtggagcagaccggcctggtgtacgtgagaggctgcgaggtg
cagggtatgctggatgacaagggacgcgtcattgaagaaggtcctgacccaaagcccaaa
cttcgaggagatgccagaacgttccgcgtatggctggaccctaaccagtatcaacaggac
atgaccagcagcattcagagtggcacagaagacccatacgagactttcaacgtcatcatg
agacgcaaacccaaggaaaacaatttcaaggcagtgctagagaccatcagaaacctgatg
aacacagagtgtgtcgtcccagactggcttcacgacattatcctaggctatggcgaccca
ggcagtgcccactactccaaaatgcctaaccagatctccacattggacttcaatgacacc
ttcctgtcgctggatcacttgcgttcatgtttccctggttacaccataaaagtcacagag
gagaaccccgaactgcaagtcttccctttcagaatcaagttccccatctcaaacaaaaca
gataaagggaagaagagaaaggctgatgaagaggaggaagacaaagaggaagacatgacc
ttgatcgtcgagccctacgtcacccccaaccgtggaccgtatccctacaaccagcccaaa
cggaatacaattcagtttacgcctactcaaattgaagccattcgagctgggatgcagcca
ggactcaccatggttgttggaccaccaggtacaggaaagacagatgttgctgttcagatc
atctcaaacctctatcacaactttcctgagcagaggaccctcatagtgacacactcgaat
caggctctgaaccagctgttcgaaaagatcatggctctagacatcgacgagcgccacctc
ctgcgtctaggccacggagaagaggagctggagaccgagaaggacttcagcagatatggt
agggtaaactacgtcttagccagaagactggagctcctcagggaggtggggagattacag
gagagcttggatgtcccaggagatgtttcttacacctgtgagacagctggacacttctac
ctttatcaggtgatatcccgctgggaagagtacatgagtaaagtcaggcctaaacagggc
aaaaaagtggaggtgcaagatgtagctgcacactttcccttccacaagtatttctcaaac
gccccacagcccgtgttcaagggccggtcatacgaagaggacatggacatcgcagaaggc
tgctaccgccacatcaagaaaatatttacccagctggaggagttcagggccttcgagctg
ctgaggagtggactggaccgctccaagtatctgctggtgaaggaagccaaaatcattgcc
atgacctgtacacatgctgcactcaaacgtcatgacctggtggagctgggattcaagtat
gacaacatcctgatggaagaagccgcacagattctggagattgagaccttcatccccctc
ctgttacagaacccggaggatggctacagcaggctgaagcgttggatcatgatcggagac
caccaccagttgccccctgtcatcaagaacatggccttccagaagtactccaacatggag
cagtctctcttcacccgatttgtgcgcctgggagtgcccaccatcgatctagatgcacag
ggccgtgcacgtgcaagcctgtgtaacctgtacaactggcgttacaaacaccttggaaac
ctgccgcatgtccagcaactgcccgaattccaggtgcccaaccctggcctgacctttgac
ttccagctaattaacgtggaggacttcaatggggtgggagaatccgagcccaacccttac
ttctaccagaacctggcagaggcggagtacgcggtggctttgtacatgtacatgcgtctg
ttgggctaccctgctgaccgcatcagcatcctcaccacctacaatggacaaaaacacctg
atcagagacgtcatcaaccagcgttgtgccggcaaccccttctttagtcagcctaacaag
ataacaacagtggacaggttccagggtcagcagaacgactacatcatcctctcactggtc
cgcaccaaggctgtgggacacctgagggatgtgaggcgtctggttgtagccatgtcaaga
gccagactgggtctgtacatctttgcccgggtgtcactgttccaaaactgcttcgagctg
actcctgccttcaaccagctcaccgccagaccccagcagctgcacatcagaccgcacgag
tactacagccaggaacagcctagagatgcttccggacagccagaccaaatcatcaagaac
atgccagagatggccaacctggtgtacaatatgtacatgcacatgatgcagacctcccag
aagtacagacagcagcaacaggagaaactggctcttcccccgcaacaagccaagacagat
gctttggccgagaaagcgccagctagctctggggaacctcaggaagaaacacccatggag
caggaaaccccagaagcagaggcgaagccggagccaaactcggaggacaccagtgagaag
aaggaaaatgaagatacagcggaccacgccaagatgccagagcatcccggaagagacagc
gacagtgacggggaggacagtggaggggaaaaagagcagtag
DBGET
integrated database retrieval system
